Extramammary Paget Disease

In order to clarify the mutational landscape of Extramammary Paget disease, we performed exome-sequencing of surgical samples and target-sequencing of formalin-fixed, paraffin-embedded tissues.

Type: Other
Archiver: EGA European Genome-Phenome Archive

1 Dataset 1 Publication

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD00001006449	37 surgical samples were interrogated by WXS, and 50 formalin-fixed, paraffin-embedded samples were interrogated by target-seq. Agilent SureSelect XT kit and SureSelect Human Exon V6 were used to generate exome libraries. Agilent SureSelect XT low input kit and custom capture panel designed on SureDesign were used to generate target-seq libraries. All libraries were sequenced on Illumina HiSeq 2500 platform.	Illumina HiSeq 2500	124

Publications	Citations
Unbiased Detection of Driver Mutations in Extramammary Paget Disease. Ishida Y, Kakiuchi N, Yoshida K, Inoue Y, Irie H, Kataoka TR, Hirata M, Funakoshi T, Matsushita S, Hata H, Uchi H, Yamamoto Y, Fujisawa Y, Fujimura T, Saiki R, Takeuchi K, Shiraishi Y, Chiba K, Tanaka H, Otsuka A, Miyano S, Kabashima K, Ogawa S. Clin Cancer Res 27: 2021 1756-1765	9