Study

Integrative multi-omic analyses of malignant pleural mesothelioma

Study ID Alternative Stable ID Type
EGAS00001004812 Other

Study Description

Multi-omic data (whole-genome sequencing, RNA-seq, EPIC 850K methylation arrays) for 123 samples from the MESOMICS project, the French project of molecular characterization of malignant pleural mesothelioma

Study Datasets 3 datasets.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001007023
The dataset includes cram files from WGS of 115 tumor samples as well as 43 matched normal tissue or blood. The sequencing was done with HiSeq X Five instrument.
HiSeq X Five 158
EGAD00001007024
The dataset includes fastq files from 109 tumor samples as well as RNA-seq gene expression R data, RNA-seq transcript expression R data, RNA-seq gene counts matrix, RNA-seq transcript counts matrix, RNA-seq gene FPKM matrix RNA-seq transcript FPKM matrix for the 109 samples. The sequencing was done with HiSeq 2000 instrument.
Illumina HiSeq 2000 110
EGAD00010002053
Data from Infinium EPIC 850K DNA methylation beadchip
Infinium EPIC DNA methylation beadchip 139

Who archives the data?

There are no publications available