Study
Multi-omics profiling of PSCCE
Study ID | Alternative Stable ID | Type |
---|---|---|
EGAS00001004889 | Other |
Study Description
We performed whole-exome sequencing, RNA sequencing and immunohistochemistry profiling of primary small cell carcinomas of the esophagus.
Study Datasets 3 datasets.
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
Dataset ID | Description | Technology | Samples |
---|---|---|---|
EGAD00001006743 |
We performed whole-exome sequencing on 46 pairs of PSCCE and matched normal sample. Somatic mutations were called using MuTect2.
|
46 | |
EGAD00001007002 |
The aligned bam file of next generation sequencing performed on PSCCE.
|
Illumina NovaSeq 6000 | 64 |
EGAD00001007647 |
Bam files of unmapped sequencing reads of samples in EGAD00001007002. When utilized in combination with corresponding aligned bam files in dataset EGAD00001007002, they contain all sequencing reads of samples.
|
Illumina NovaSeq 6000 | 64 |
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