Study

Detection of Gene Fusions using Targeted Next-Generation Sequencing – a Comparative Evaluation

Study ID Alternative Stable ID Type
EGAS00001004934 Cancer Genomics

Study Description

Study Datasets 1 dataset.

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Dataset ID Description Technology Samples
EGAD00001006913
Five commercially available parallel sequencing assays were evaluated for their ability to detect gene fusions in eight cell lines and 18 FFPE tissue samples carrying a variety of known gene fusions. Four RNA-based assays and one DNA-based assay were compared; two were hybrid capture-based, TruSight Tumor 170 Assay (Illumina) and SureSelect XT HS Custom Panel (Agilent), and three were amplicon-based, Archer FusionPlex Lung Panel (ArcherDX), QIAseq RNAscan Custom Panel (Qiagen) and Oncomine ... (Show More)
Illumina MiSeq,Ion Torrent S5,NextSeq 500 228

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