Bone marrow derived stromal cells from Myelodysplastic Syndromes

Study ID Alternative Stable ID Type
EGAS00001005051 Other

Study Description

In this study we performed exome sequencing of bone marrow derived, in-vitro expanded mesenchymal stromal cells from patients with Myelodysplastic Syndromes in order to assess clonal mutations in the non hematopoietic compartment. We used bone marrow mononuclear cells as germline controls. Validation was carried out with amplicon based resequencing. Alongside we provide RNA Sequencing of MDS and healthy MSCs.

Study Datasets 2 datasets.

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Dataset ID Description Technology Samples
bam files, mapped to hg19 after dedup, recal, recalibration and clipping of overlapping redas
Illumina HiSeq 4000,Illumina MiSeq,Illumina NovaSeq 6000 210
This dataset contains bam files mapped to hg19 that either were primary bone marrow cells or sorted human cells after long term engraftment in NSG mice.
Illumina NovaSeq 6000 229

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