Study

COVID19 Host Genetic Initiative

Study ID Alternative Stable ID Type
EGAS00001005304 Other

Study Description

The COVID-19 host genetics initiative is a bottom-up collaborative effort that has three main goals: 1. Provide an environment to foster the sharing of resources to facilitate COVID-19 host genetics research (e.g. protocols, questionnaires). 2. Organize analytical activities across studies to identify genetic determinants of COVID-19 susceptibility and severity. 3. Provide a platform to share the results from such activities, as well as the individual-level data where possible, to benefit the broader scientific community. Here, we release the harmonized individual-level data for the subset of individuals participated in COVID-19 HGI. Please refer to this data dictionary of clinical information: https://docs.google.com/spreadsheets/d/1whu_MjShXxbdoAJMCYxZ5C-vWOcRivwfWglTcBRNZgQ/edit#gid=470747846 Please cite our flagship paper (PMID: 34237774) and this preprint (PMID: 33758887) when you use these data for your publications.

Study Datasets 29 datasets.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001007832
Basic phenotypes for BRACOVID cohort.
348
EGAD00001007833
Lab values for BRACOVID cohort.
234
EGAD00001007834
Basic phenotypes for BelCovid2 cohort.
392
EGAD00001007835
Lab values for BelCovid2 cohort.
262
EGAD00001007836
Basic phenotypes for GEN_COVID cohort.
1141
EGAD00001007837
Lab values for GEN_COVID cohort.
739
EGAD00001007838
Basic phenotypes for Hostage1 cohort.
847
EGAD00001007839
Lab values for Hostage1 cohort.
847
EGAD00001007840
Basic phenotypes for Hostage2 cohort.
306
EGAD00001007841
Lab values for Hostage2 cohort.
306
EGAD00001007842
Basic phenotypes for Hostage3 cohort.
71
EGAD00001007843
Lab values for Hostage3 cohort.
71
EGAD00001007844
Basic phenotypes for Hostage4 cohort.
121
EGAD00001007845
Lab values for Hostage4 cohort.
121
EGAD00001007846
Basic phenotypes for INMUNGEN_CoV2 cohort.
367
EGAD00001007847
Lab values for INMUNGEN_CoV2 cohort.
37
EGAD00001007848
Basic phenotypes for SPGRX cohort.
364
EGAD00001007849
Basic phenotypes for SweCovid cohort.
113
EGAD00001007850
Lab values for SweCovid cohort.
113
EGAD00010002171
Cohort: Raw genotype files for Hostage2 cohort. Genotype Chip: Illumina’s (Illumina Inc., San Diego, U.S.) Global Screening Array-24 Multi Disease (GSA) Version 2.0 B1 genomic build: b37
306
EGAD00010002172
Cohort: Raw genotype files for BRACOVID cohort. Genotype Chip: Axiom_PMRA.r3 array genomic build: b37
348
EGAD00010002173
Cohort: Raw genotype files for Hostage3 cohort. Genotype Chip: Illumina’s (Illumina Inc., San Diego, U.S.) Global Screening Array-24 Multi Disease (GSA) Version 2.0 B1 genomic build: b37
71
EGAD00010002174
Cohort: Raw genotype files for INMUNGEN_CoV2 cohort. Genotype Chip: HumanCore Exome Chip (Illumina) and Axiom Spanish Biobank Array (Thermofisher) genomic build: b37
367
EGAD00010002175
Cohort: Raw genotype files for SweCovid cohort. Genotype Chip: Illumina Global Screening Array-24 v3.0 + Multi-Disease beadchip genomic build: b37
113
EGAD00010002176
Cohort: Raw genotype files for SPGRX cohort. Genotype Chip: the Illumina Global Screening Array-24 v3.0 genomic build: b38
364
EGAD00010002177
Cohort: Raw genotype files for GEN_COVID cohort. Genotype Chip: Illumina Global Screening Array-24 v3.0 + Multi-Disease beadchip genomic build: b37
1141
EGAD00010002178
Cohort: Raw genotype files for Hostage4 cohort. Genotype Chip: Illumina’s (Illumina Inc., San Diego, U.S.) Global Screening Array-24 Multi Disease (GSA) Version 2.0 B1 genomic build: b37
121
EGAD00010002179
Cohort: Raw genotype files for BelCovid2 cohort. Genotype Chip: Illumina Global Screening Array-24 v3.0 + Multi-Disease beadchip genomic build: b37
392
EGAD00010002180
Cohort: Raw genotype files for Hostage1 cohort. Genotype Chip: Illumina’s (Illumina Inc., San Diego, U.S.) Global Screening Array-24 Multi Disease (GSA) Version 2.0 B1 genomic build: b37
847

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