Nucleosome footprinting in plasma cell-free DNA for diagnosis of ovarian cancer

Study ID Alternative Stable ID Type
EGAS00001005361 Other

Study Description

Fragmentation patterns of plasma cell-free DNA (cfDNA) are known to reflect nucleosome positions of cell types contributing to cfDNA. Based on cfDNA fragmentation patterns, the deviation in nucleosome footprints was quantified between diagnosed ovarian cancer patients and healthy individuals.

Study Datasets 1 dataset.

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Dataset ID Description Technology Samples
This dataset includes FASTQ files of low coverage whole genome sequencing of cell free DNA from plasma samples. The samples include 271 plasma samples of patients with an adnexal mass and 125 plasma samples of healthy individuals.
Illumina HiSeq 2500 396

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