Single-cell genome-wide concurrent haplotyping and copy-number profiling through genotyping-by-sequencing
|Study ID||Alternative Stable ID||Type|
Study Datasets 3 datasets.
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
scGBS is a single-cell sequencing-based methodology to haplotype and copy-number profile single cells. Genomic size and complexity is reduced through restriction enzyme digestion and DNA is genotyped through sequencing of the restriction fragments. scGBS data serves as the input for haplarithmisis, an algorithm we previously developed for SNP array-based single-cell haplotyping (Zamani Esteki et al., 2015). We established technical parameters and developed an analysis pipeline enabling accurate ... (Show More)
|Illumina HiSeq 2500,NextSeq 500||49|
HapMap samples for haplotyping and copy-number profiling via SNP array
|Illumina HumanCytoSNP-12 v2.1||11|
PGT samples for haplotyping and copy-number profiling via SNP array
|Illumina HumanCytoSNP-12 v2.1||39|
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