Study
Absolute copy number fitting from shallow whole genome sequencing data
| Study ID | Alternative Stable ID | Type |
|---|---|---|
| EGAS00001005601 | Whole Genome Sequencing |
Study Description
Study Datasets 3 datasets.
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
| Dataset ID | Description | Technology | Samples |
|---|---|---|---|
| EGAD00001008118 |
This dataset contains 60 .bam files of shallow WGS data (~0.1X) from ovarian cancer cell lines. Sequencing reads were aligned to the 1000 Genomes Project GRCh37-derived reference genome using the BWA aligner (v.0.07.17; CRUK-CI alignment pipeline).
|
Illumina HiSeq 4000 | 60 |
| EGAD00001008119 |
This dataset contains 148 .bam files of shallow WGS data (~0.1X) from OV04 PDX samples. Sequencing reads were aligned to the 1000 Genomes Project GRCh37-derived reference genome using the BWA aligner (v.0.07.17; CRUK-CI alignment pipeline).
|
Illumina HiSeq 4000 | 148 |
| EGAD00001008121 |
This dataset contains 142 .bam files of shallow WGS data (~0.1X) from OV04 patient samples. Sequencing reads were aligned to the 1000 Genomes Project GRCh37-derived reference genome using the BWA aligner (v.0.07.17; CRUK-CI alignment pipeline).
|
Illumina NovaSeq 6000 | 142 |
Who archives the data?
