Study

Single cell RNA sequencing of colorectal cancer patients (CRC-SG1)

Study ID Alternative Stable ID Type
EGAS00001006013 Other

Study Description

Fresh single-cell suspensions were loaded into the Chromium system (10x Genomics) targeting 5,000 cells per well. Barcoded sequencing libraries were generated using 3’v3 Reagent kit.

Study Datasets 1 dataset.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001008555
Raw sequencing reads were processed as single end sequencing, aligned to the human reference genome GRCh38 and processed using CellRanger 3.1.
Illumina HiSeq 4000 89

Who archives the data?

There are no publications available