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Single cell RNA sequencing of colorectal cancer patients (KUL3/KUL5)

Libraries for scRNA-seq were generated using the Chromium Single Cell 3′ or 5′ library and Gel Bead & Multiplex Kit from 10x Genomics. Aimed to profile 5000 cells per library (if sufficient cells were retained during dissociation).

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001008584 Illumina HiSeq 4000 9
EGAD00001008585 unspecified 26
Publications Citations
Single-cell and bulk transcriptome sequencing identifies two epithelial tumor cell states and refines the consensus molecular classification of colorectal cancer.
Nat Genet 54: 2022 963-975