Study
Whole genome sequencing of multifocal small intestinal neuroendocrine tumors
| Study ID | Alternative Stable ID | Type |
|---|---|---|
| EGAS00001006294 | Whole Genome Sequencing |
Study Description
Study Datasets 1 dataset.
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| Dataset ID | Description | Technology | Samples |
|---|---|---|---|
| EGAD00001008831 |
This dataset includes whole genome sequences of 75 synchronous primary tumors, 15 metastases, and corresponding normal samples from 13 patients with multifocal ileal neuroendocrine tumors. The whole genomes were sequenced on Illumina HiSeq X Ten to generate 151-bp paired-end reads, which were aligned to GRCh38/hg38 reference assembly using BWA–MEM and duplicate-marked with Picard tools. GATK was utilized for base score recalibration and local indel re-alignments. The whole genomes are ... (Show More)
|
HiSeq X Ten | 108 |
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