Study
Plasma whole genome sequencing from patients with stage IV colorectal cancer and microsatellite instability
Study ID | Alternative Stable ID | Type |
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EGAS00001006377 | Other |
Study Description
This study aims to explore genomic features of cancer in plasma WGS data from patients with advanced colorectal cancer. Cell-free DNA (cfDNA) was extracted from plasma using the QIAamp Circulating Nucleic Acid Kit. Libraries were prepared with 5 to 250 ng of cfDNA using the NEBNext DNA Library Prep Kit.
Study Datasets 1 dataset.
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Dataset ID | Description | Technology | Samples |
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EGAD00001008999 |
This dataset contains plasma WGS data from patients with stage IV colorectal cancer (CRC, n = 16) and healthy individuals (n = 21) used in the Pointy manuscript. Patients with CRC provided written consent and samples were collected as performed as described previously (Clinical-Trials.gov number NCT01876511; Georgiadis et al., 2019, Le et al., 2017). Plasma samples from 21 healthy control individuals were procured through BioIVT. Cell-free DNA (cfDNA) was extracted from plasma using the QIAamp ... (Show More)
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Illumina HiSeq 2000 | 37 |
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