Bone marrow single cell genomics from blood cancer samples

The overall goal of this study was to characterize bone marrow cells based on their transcriptome, surface protein expression and BCR- and TCR VDJ-profile for accurate identification of clinically relevant cell states. This project has received funding from the European Union Horizon 2020 research and innovation programme under grant agreement No 824110 (EASI-Genomics)

Type: Other
Archiver: European Genome-Phenome Archive (EGA)

1 Dataset 1 Publication

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD00001011055	Four different types of transcriptomic single-cell sequencing of blood from childhood B acute lymphoblastic leukemia.	Illumina NovaSeq 6000	6

Publications	Citations
Genomic determinants of therapy response in ETV6::RUNX1 leukemia. Oksa L, Moisio S, Maqbool K, Kramer R, Nikkilä A, Jayasingha B, Mäkinen A, Foroughi-Asl H, Rounioja S, Suhonen J, Krali O, Voutilainen M, Lahnalampi M, Vepsäläinen K, Huang S, Duque-Afonso J, Hauer J, Nordlund J, Wirta V, Lohi O, Heinäniemi M. Leukemia 39: 2025 2125-2139	0