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Whole Genome Sequence and RNASeq Samples for Lung Cancer

Short Read Whole Genome Sequence and RNASeq Samples for Lung Cancer

Type: Other
Archiver: European Genome-phenome Archive (EGA)

2 Datasets 2 Publications

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD00001015399	DNA WGS Short Read Sequence (Illumina NovaSeq) for manuscript titled: "Performance of Somatic Structural Variant Calling in Lung Cancer using Oxford Nanopore Sequencing Technology"	Illumina NovaSeq 6000	14
EGAD00001016147	DNA WGS BAM files for PMID: 41845530 titled: Multi-omics reveals key molecular and cellular features of advanced small cell lung cancers associated with distinct therapeutic opportunities	DNBSEQ-G400 Illumina NovaSeq 6000	1

Publications	Citations
Performance of somatic structural variant calling in lung cancer using Oxford Nanopore sequencing technology. Liu L, Zhang J, Wood S, Newell F, Leonard C, Koufariotis LT, Nones K, Dalley AJ, Chittoory H, Bashirzadeh F, Son JH, Steinfort D, Williamson JP, Bint M, Pahoff C, Nguyen PT, Twaddell S, Arnold D, Grainge C, Simpson PT, Fielding D, Waddell N, Pearson JV. BMC Genomics 25: 2024 898	4
Multi-omics reveals key molecular and cellular features of advanced small cell lung cancers associated with distinct therapeutic opportunities. Nones K, Lakis V, Dalley AJ, Ryan K, Chittoory H, Ferguson K, Fitzgerald K, Newell F, Koufariotis LT, Bashirzadeh F, Son JH, Singh M, Nandakumar L, Fairbairn D, Cummings M, Steinfort D, Christie JJ, Gibney M, Williamson JP, Pattison A, McIntosh L, Pahoff C, Nguyen PT, Solujic J, Brown M, Twaddell S, Arnold D, Grainge C, Gune S, Holmes O, Leonard C, Wood S, Pearson JV, Lakhani SR, Simpson PT, Waddell N, Fielding D. Genome Med 18: 2026 47	0

Publications

Citations

Performance of somatic structural variant calling in lung cancer using Oxford Nanopore sequencing technology.
Liu L, Zhang J, Wood S, Newell F, Leonard C, Koufariotis LT, Nones K, Dalley AJ, Chittoory H, Bashirzadeh F, Son JH, Steinfort D, Williamson JP, Bint M, Pahoff C, Nguyen PT, Twaddell S, Arnold D, Grainge C, Simpson PT, Fielding D, Waddell N, Pearson JV. BMC Genomics 25: 2024 898

Multi-omics reveals key molecular and cellular features of advanced small cell lung cancers associated with distinct therapeutic opportunities.
Nones K, Lakis V, Dalley AJ, Ryan K, Chittoory H, Ferguson K, Fitzgerald K, Newell F, Koufariotis LT, Bashirzadeh F, Son JH, Singh M, Nandakumar L, Fairbairn D, Cummings M, Steinfort D, Christie JJ, Gibney M, Williamson JP, Pattison A, McIntosh L, Pahoff C, Nguyen PT, Solujic J, Brown M, Twaddell S, Arnold D, Grainge C, Gune S, Holmes O, Leonard C, Wood S, Pearson JV, Lakhani SR, Simpson PT, Waddell N, Fielding D. Genome Med 18: 2026 47