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single cell transcriptomic analysis of tumor samples collected from 5 patients with EMM

Contains the raw single cell RNAseq data used for the study

Type: RNASeq
Archiver: European Genome-phenome Archive (EGA)

1 Dataset 2 Publications

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD50000000053	This dataset contains 16 fastq files of raw single-cell RNAsequencing data from 6 patients with Extramedullary multiple myeloma used for the study "Longitudinal Multi-Omics Study Reveals Molecular Drivers and Tumor Microenvironment in Extramedullary Multiple Myeloma"	Illumina NovaSeq 6000	6

Publications	Citations
Beyond the marrow: insights from comprehensive next-generation sequencing of extramedullary multiple myeloma tumors. Jelinek T, Zihala D, Sevcikova T, Anilkumar Sithara A, Kapustova V, Sahinbegovic H, Venglar O, Muronova L, Broskevicova L, Nenarokov S, Bilek D, Popkova T, Plonkova H, Vrana J, Zidlik V, Hurnik P, Havel M, Hrdinka M, Chyra Z, Stracquadanio G, Simicek M, Hajek R. Leukemia 38: 2024 1323-1333	37
Composition and Functional State of T and NK Cells in the Extramedullary Myeloma Tumor Microenvironment. Anilkumar Sithara A, Kapustova V, Zihala D, Venglar O, Bilek D, Helal M, John M, Radova E, Broskevicova L, Vrana J, Havlova G, Muronova L, Popkova T, Mihalyova J, Plonkova H, Nenarokov S, Bisht K, Wang H, Van de Velde H, Charvatova S, Demel I, Kascak M, Navratil M, Havel M, Bago J, Simicek M, Riedel A, Rasche L, Sevcikova T, Landgren O, Hajek R, Jelinek T. Blood Cancer Discov 7: 2026 250-265	0

Publications

Citations

Beyond the marrow: insights from comprehensive next-generation sequencing of extramedullary multiple myeloma tumors.
Jelinek T, Zihala D, Sevcikova T, Anilkumar Sithara A, Kapustova V, Sahinbegovic H, Venglar O, Muronova L, Broskevicova L, Nenarokov S, Bilek D, Popkova T, Plonkova H, Vrana J, Zidlik V, Hurnik P, Havel M, Hrdinka M, Chyra Z, Stracquadanio G, Simicek M, Hajek R. Leukemia 38: 2024 1323-1333

Composition and Functional State of T and NK Cells in the Extramedullary Myeloma Tumor Microenvironment.
Anilkumar Sithara A, Kapustova V, Zihala D, Venglar O, Bilek D, Helal M, John M, Radova E, Broskevicova L, Vrana J, Havlova G, Muronova L, Popkova T, Mihalyova J, Plonkova H, Nenarokov S, Bisht K, Wang H, Van de Velde H, Charvatova S, Demel I, Kascak M, Navratil M, Havel M, Bago J, Simicek M, Riedel A, Rasche L, Sevcikova T, Landgren O, Hajek R, Jelinek T. Blood Cancer Discov 7: 2026 250-265