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Analysis of cell type contributions to cell free DNA in health and disease.

This study looks at cell type contributions to cell free DNA in health and disease.

Type: Whole Genome Sequencing
Archiver: European Genome-phenome Archive (EGA)

1 Dataset 2 Publications

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD50000000257	Raw paired-end whole-genome sequencing data of plasma cell free DNA on the NovaSeq 6000.	Illumina NovaSeq 6000	810

Publications	Citations
Cell type signatures in cell-free DNA fragmentation profiles reveal disease biology. Stanley KE, Jatsenko T, Tuveri S, Sudhakaran D, Lannoo L, Van Calsteren K, de Borre M, Van Parijs I, Van Coillie L, Van Den Bogaert K, De Almeida Toledo R, Lenaerts L, Tejpar S, Punie K, Rengifo LY, Vandenberghe P, Thienpont B, Vermeesch JR. Nat Commun 15: 2024 2220	54
DAGIP: alleviating cell-free DNA sequencing biases with optimal transport. Passemiers A, Tuveri S, Jatsenko T, Vanderstichele A, Busschaert P, Coosemans A, Timmerman D, Tejpar S, Vandenberghe P, Lambrechts D, Raimondi D, Vermeesch JR, Moreau Y. Genome Biol 26: 2025 49	3