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WHOLE GENOME SEQUENCING OF CLEAR CELL RENAL CELL CARCINOMA IN VHL PATIENT

This submission contains Whole Genome Sequencing data of six ccRCCs, four cysts and one blood DNA sample of a VHL patient.

Type: Whole Genome Sequencing
Archiver: European Genome-phenome Archive (EGA)

1 Dataset 2 Publications

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD50000000425	To characterize clear cell Renal Cell Carcinoma (ccRCC), we set up a comprehensive multi-omics pilot study on a VHL-ccRCC-patient. Whole Genome Sequencing (WGS) was applied on six ccRCCs, four cysts and one blood DNA sample as germinal control. Raw-data were analyzed with GENomics-DRAGEN platform. We will upload WGS-Data for 11 samples (6 ccRCCs, 4 Cysts, 1 blood).	Illumina NovaSeq 6000	11

Publications	Citations
Intra- and inter-tumoural heterogeneity in von Hippel-Lindau disease-related renal cancer: a multimodal data study protocol. Rowe I, Colombo A, Corea F, Pisu F, Genova F, Uggé M, Ciaparrone C, Giangrasso A, Pipitone GB, Scotti GM, Larcher A, Colciago G, Morelli MJ, Lucianò R, Carrera P, Zeppa P, Caputo A, Bertini R, Montorsi F, Salonia A, Verze P, Palmisano A, Esposito A, Bernardi R, Capitanio U. Eur Radiol Exp 9: 2025 114	0
Distinct genomic, microenvironmental, and nephron signatures in VHL kidney cysts and tumors. Rowe I, Corea F, Pipitone GB, Scotti GM, Lucianò R, Sant'Angelo M, Tenace NP, Franco I, Ferrara AM, Doglioni C, Ponzoni M, De Cobelli F, Montorsi F, Capitanio U, Carrera P, Larcher A, Salonia A, VHL OSR Program. Sci Rep 16: 2026 4394	0

Publications

Citations

Intra- and inter-tumoural heterogeneity in von Hippel-Lindau disease-related renal cancer: a multimodal data study protocol.
Rowe I, Colombo A, Corea F, Pisu F, Genova F, Uggé M, Ciaparrone C, Giangrasso A, Pipitone GB, Scotti GM, Larcher A, Colciago G, Morelli MJ, Lucianò R, Carrera P, Zeppa P, Caputo A, Bertini R, Montorsi F, Salonia A, Verze P, Palmisano A, Esposito A, Bernardi R, Capitanio U. Eur Radiol Exp 9: 2025 114

Distinct genomic, microenvironmental, and nephron signatures in VHL kidney cysts and tumors.
Rowe I, Corea F, Pipitone GB, Scotti GM, Lucianò R, Sant'Angelo M, Tenace NP, Franco I, Ferrara AM, Doglioni C, Ponzoni M, De Cobelli F, Montorsi F, Capitanio U, Carrera P, Larcher A, Salonia A, VHL OSR Program. Sci Rep 16: 2026 4394