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16S rRNA Rectal Mucus

16S rRNA sequencing of rectal mucus samples from patients suspected to have colorectal cancer. This is 1 of 4 sequencing experiments on the same sample type.

Type: Cancer Genomics
Archiver: European Genome-phenome Archive (EGA)

1 Dataset 1 Publication

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD50000001803	Metataxonomic sequencing data targeting the 16S rRNA gene hypervariable regions V3 and V4 on 545 rectal mucus samples from patients suspected to have colorectal cancer and healthy controls.	Illumina MiSeq	545

Publications	Citations
Hologenomic analysis of rectal mucus sampling for detection of adenomatous polyps and colorectal cancer. Tock AJ, Patel KS, Morales-Walker E, Zhang L, Orthodoxou C, MacRitchie AD, Njoroge S, Olaniru OE, Mozolowski G, Mendes I, Baker DJ, Siew M, Humphrey HN, Walker-Davies ET, McDermott F, Spencer S, Bird S, Savva KV, Cunningham C, Rottenburg H, Sisodia H, Battersby NJ, Jones GAR, Lacy-Colson J, Baggaley AE, Peters CJ, Dodd A, Kang K, Hamon C, Crespillo-Casado A, Law E, Sands M, Lywood H, Page AJ, Daniels I, Wise D. Nat Commun 16: 2025 10876	0

Publications

Citations

Hologenomic analysis of rectal mucus sampling for detection of adenomatous polyps and colorectal cancer.
Tock AJ, Patel KS, Morales-Walker E, Zhang L, Orthodoxou C, MacRitchie AD, Njoroge S, Olaniru OE, Mozolowski G, Mendes I, Baker DJ, Siew M, Humphrey HN, Walker-Davies ET, McDermott F, Spencer S, Bird S, Savva KV, Cunningham C, Rottenburg H, Sisodia H, Battersby NJ, Jones GAR, Lacy-Colson J, Baggaley AE, Peters CJ, Dodd A, Kang K, Hamon C, Crespillo-Casado A, Law E, Sands M, Lywood H, Page AJ, Daniels I, Wise D. Nat Commun 16: 2025 10876