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Liquid biopsy sequencing

Liquid biopsy samples were collected from patients. Cell free DNA was extracted and profiled by NGS. Samples were analyzed by low pass whole genome sequencing, targeted panel sequencing using a custom hybrid capture panel, or both.

Type: Cancer Genomics
Archive: European Genome-phenome Archive (EGA)

1 Publication

Publications	Citations
Tumor-derived cell-free DNA detected in cerebrospinal fluid enables minimally invasive profiling of pediatric brain tumors. Nobre L, Nakano Y, Burns I, Siddaway R, Zápotocky M, Johnson M, Rana M, Li C, Lyn RK, Yuditskiy R, Ku M, Sheth J, Levine AB, Nesvick CL, Das A, Cacciotti C, Zelcer S, Climans SA, MacDonald M, Negm L, Chung J, Bennett J, Bondoc A, Loukides J, Stengs L, Edwards M, Bouffet E, Ramaswamy V, Liu AP, Huang A, Bartels U, Dirks PB, Tabori U, Hawkins C. J Clin Invest 136: 2026 e197391	0

Publications

Citations

Tumor-derived cell-free DNA detected in cerebrospinal fluid enables minimally invasive profiling of pediatric brain tumors.
Nobre L, Nakano Y, Burns I, Siddaway R, Zápotocky M, Johnson M, Rana M, Li C, Lyn RK, Yuditskiy R, Ku M, Sheth J, Levine AB, Nesvick CL, Das A, Cacciotti C, Zelcer S, Climans SA, MacDonald M, Negm L, Chung J, Bennett J, Bondoc A, Loukides J, Stengs L, Edwards M, Bouffet E, Ramaswamy V, Liu AP, Huang A, Bartels U, Dirks PB, Tabori U, Hawkins C. J Clin Invest 136: 2026 e197391