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HiC data of human LCLs

HiC data of human LCLs data in two cases with non-coding structural variants in the FOXG1 TAD. Both processed data and raw sequencing.

2 Datasets 1 Publication

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD50000002535	HiC data of human LCLs with non-coding deletion in the FOXG1 TAD. Raw (fastq) and processed (.hic) files. Prepped with Arima kit and sequenced with Illumina Novaseq 6000	Illumina NovaSeq 6000	1
EGAD50000002536	HiC data of human LCLs with non-coding translocation in the FOXG1 TAD. Raw (fastq) and processed (.hic) files. Prepped with Arima kit and sequenced with Illumina Novaseq 6000	Illumina NovaSeq 6000	1

Publications	Citations
Non-coding structural variants disrupt FOXG1 transcriptional regulation in early neurodevelopment. Hamerlinck L, D'haene E, Vaughan MB, Van Loon N, Pérez Baca MDR, Leimbacher S, Kosicki M, Colombo L, Genbrugge L, Vantomme L, Daal E, Ramos LLP, Avdjieva-Tzavella DM, Goel H, Devriendt K, Jordanova A, Dheedene A, Visel A, Menten B, Callewaert B, Vergult S. Nat Commun 17: 2026 7197	1