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Dissecting the sources of variation in neuronally differentiated iPSC lines through multi-omics analysis

Multi-omics analysis for rare neurodevelopmental disorders. The material consists of patient-derived IPSCs from NANS, CDH2, and DM1 patients. In some cases the genotype was rescued using CRISPR/Cas9 gene editing. The studied omics include Genomics, Transcriptomics, DNA methylation, Proteomics, Metabolomics, and Lipidomics.

Type: RNASeq
Archive: European Genome-phenome Archive (EGA)

2 Datasets

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD50000002842	FASTQ files from RNA-sequencing data measured in iPSC-derived neurons in 43 samples	NextSeq 2000	43
EGAD50000002843	FASTQ from Enzymatic Methylation sequencing data measured in iPSC-derived neurons in 44 samples	Illumina NovaSeq 6000	42