A Somatic Reference Standard for Cancer Genome Sequencing

Study ID Alternative Stable ID Type
phs000932 Tumor vs. Matched-Normal

Study Description

In this study, we separately performed PCR-free whole genome sequencing on the paired tumor/normal melanoma COLO-829 and lymphoblastoid COLO-829BL cell lines across three separate institutions (TGen, Illumina, Genome Sciences Centre at the British Columbia Cancer Agency). We performed a meta-analysis of all data, in combination with the originally reported analysis of these cell lines by Pleasance et al., and report a somatic reference standard based on consensus events. This standard can be used as a reference for tumor/normal whole genome analyses.

Archive Link Archive Accession
dbGaP phs000932

Who archives the data?

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