DAC

Data Access Committee of DKFZ-Epigenomics

Dac ID Contact Person Email Access Information
EGAC00001000279 Dieter Weichenhan d [dot] weichenhan [at] dkfz [dot] de No additional information is available

This DAC controls 18 datasets:

Dataset ID Description Technology Samples
EGAD00001000601 NA Illumina HiSeq 2000 1
EGAD00001000602 NA Illumina HiSeq 2000 1
EGAD00001001675 RNA-seq of peripheral blood samples from CLL patients. Illumina HiSeq 2000 42
EGAD00001001676 Tagmentation-based whole-genome bisulfite sequencing of isolated cell types from healthy controls. Illumina HiSeq 2000 12
EGAD00001003419 Whole exome seqeuncing from primary human JMML samples Illumina HiSeq 2000 50
EGAD00001004791 The dataset contains RNA-seq data of 96 EOPC patients and 9 controls. For some patients multiple tissue samples were sequenced ("multi-area" samples). The RNA extraction and sequencing protocol was earlier described in Weischenfeldt et al, Cancer Cell, 2013. Illumina HiSeq 2000 128
EGAD00001005109 This dataset contains primary raw data of whole-genome sequencing, whole-genome bisulfite sequencing, ATAC-seq, ChIP-seq (ChIP-mentation) of histone variants and modifications, as well as RNA-seq of giant cell tumor of bone tissue and primary cell line samples. HiSeq X Ten,Illumina HiSeq 2000 29
EGAD00001007504 NA HiSeq X Ten 12
EGAD00001008198 NA Illumina NovaSeq 6000 1
EGAD00001008199 NA Illumina NovaSeq 6000 1
EGAD00010000646 DNA methylation analysis of 35 prostate tumor and 6 normal prostate samples 41
EGAD00010000871 CLL and normal B cell samples using 450K 226
EGAD00010001296 DNA methylation analysis from primary human JMML and normal blood samples using 450K Illumina_450K 0
EGAD00010001298 primary human ACC and normal samples using 450K Illumina_450K 110
EGAD00010001430 Gene expression analysis from primary human JMML samples using Illumina Human HT-12 v4 Illumina_HumanHT-12_V4 15
EGAD00010001879 Control human dermal fibroblasts from patient forearm Illumina 450k 12
EGAD00010001880 Case human dermal fibroblasts from patient forearm Illumina 450k 12
EGAD00010002312 Illumina EPIC arrays Naevus Melanoma Spitz Case Illumina EPIC array 24