Genomic, epigenomic and transcriptomic profiling of GCTB
This dataset contains primary raw data of whole-genome sequencing, whole-genome bisulfite sequencing, ATAC-seq, ChIP-seq (ChIP-mentation) of histone variants and modifications, as well as RNA-seq of giant cell tumor of bone tissue and primary cell line samples.
- 26/06/2019
- 29 samples
- DAC: EGAC00001000279
- Technologies: HiSeq X Ten, Illumina HiSeq 2000
DUO:0000007 version: 2019-01-07
disease specific research
This data use permission indicates that use is allowed provided it is related to the specified disease.
ModifiersMONDO:0005674
DUO:0000012 version: 2019-01-07
research specific restrictions
This data use modifier indicates that use is limited to studies of a certain research type.
DUO:0000014 version: 2019-01-07
research use only
This data use limitation indicates that use is limited to research purposes (e.g., does not include its use in clinical care).
DUO:0000021 version: 2019-01-07
ethics approval required
This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.
DKFZ-Epigenomics-Data-Transfer-Agreement
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001003730 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
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|---|---|---|---|---|
| EGAF00002528688 | fastq.gz | 22.0 GB | Report |
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| EGAF00002528689 | fastq.gz | 23.2 GB | Report |
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| EGAF00002528690 | fastq.gz | 18.9 GB | Report |
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| EGAF00002528691 | fastq.gz | 19.9 GB | Report |
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| EGAF00002528692 | fastq.gz | 18.1 GB | Report |
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| EGAF00002528693 | fastq.gz | 18.8 GB | Report |
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| EGAF00002528694 | fastq.gz | 18.9 GB | Report |
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| EGAF00002528695 | fastq.gz | 20.1 GB | Report |
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| EGAF00002528696 | fastq.gz | 18.3 GB | Report |
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| EGAF00002528697 | fastq.gz | 19.4 GB | Report |
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| EGAF00002528698 | fastq.gz | 21.9 GB | Report |
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| EGAF00002528699 | fastq.gz | 23.4 GB | Report |
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| EGAF00002528700 | fastq.gz | 19.5 GB | Report |
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| EGAF00002528701 | fastq.gz | 20.7 GB | Report |
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| EGAF00002528702 | fastq.gz | 35.3 GB | Report |
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| EGAF00002528703 | fastq.gz | 44.0 GB | Report |
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| EGAF00002528704 | fastq.gz | 37.8 GB | Report |
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| EGAF00002528705 | fastq.gz | 48.3 GB | Report |
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| EGAF00002528706 | fastq.gz | 35.8 GB | Report |
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| EGAF00002528707 | fastq.gz | 44.8 GB | Report |
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| EGAF00002528708 | fastq.gz | 36.2 GB | Report |
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| EGAF00002528709 | fastq.gz | 44.9 GB | Report |
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| EGAF00002528710 | fastq.gz | 37.6 GB | Report |
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| EGAF00002528711 | fastq.gz | 45.5 GB | Report |
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| EGAF00002528712 | fastq.gz | 37.1 GB | Report |
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| EGAF00002528713 | fastq.gz | 50.8 GB | Report |
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| EGAF00002528714 | fastq.gz | 36.8 GB | Report |
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| EGAF00002528715 | fastq.gz | 45.9 GB | Report |
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| EGAF00002528716 | fastq.gz | 35.1 GB | Report |
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| EGAF00002528717 | fastq.gz | 43.9 GB | Report |
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| EGAF00002528718 | fastq.gz | 37.9 GB | Report |
|
| EGAF00002528719 | fastq.gz | 51.0 GB | Report |
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| EGAF00002528720 | fastq.gz | 33.4 GB | Report |
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| EGAF00002528721 | fastq.gz | 43.7 GB | Report |
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| EGAF00002528722 | fastq.gz | 37.2 GB | Report |
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| EGAF00002528723 | fastq.gz | 49.0 GB | Report |
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| EGAF00002528724 | fastq.gz | 37.3 GB | Report |
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| EGAF00002528725 | fastq.gz | 49.9 GB | Report |
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| EGAF00002528726 | fastq.gz | 2.5 GB | Report |
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| EGAF00002528727 | fastq.gz | 2.5 GB | Report |
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| EGAF00002528728 | fastq.gz | 3.0 GB | Report |
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| EGAF00002528729 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528730 | fastq.gz | 3.0 GB | Report |
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| EGAF00002528731 | fastq.gz | 3.0 GB | Report |
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| EGAF00002528732 | fastq.gz | 3.5 GB | Report |
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| EGAF00002528733 | fastq.gz | 3.6 GB | Report |
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| EGAF00002528734 | fastq.gz | 3.5 GB | Report |
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| EGAF00002528735 | fastq.gz | 3.5 GB | Report |
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| EGAF00002528736 | fastq.gz | 3.5 GB | Report |
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| EGAF00002528737 | fastq.gz | 3.6 GB | Report |
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| EGAF00002528738 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528739 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528740 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528741 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528742 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528743 | fastq.gz | 3.2 GB | Report |
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| EGAF00002528744 | fastq.gz | 3.6 GB | Report |
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| EGAF00002528745 | fastq.gz | 3.8 GB | Report |
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| EGAF00002528746 | fastq.gz | 3.6 GB | Report |
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| EGAF00002528747 | fastq.gz | 3.7 GB | Report |
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| EGAF00002528748 | fastq.gz | 3.6 GB | Report |
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| EGAF00002528749 | fastq.gz | 3.8 GB | Report |
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| EGAF00002528750 | fastq.gz | 3.0 GB | Report |
|
| EGAF00002528751 | fastq.gz | 3.0 GB | Report |
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| EGAF00002528752 | fastq.gz | 3.0 GB | Report |
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| EGAF00002528753 | fastq.gz | 3.1 GB | Report |
|
| EGAF00002528754 | fastq.gz | 3.0 GB | Report |
|
| EGAF00002528755 | fastq.gz | 3.1 GB | Report |
|
| EGAF00002528756 | fastq.gz | 3.4 GB | Report |
|
| EGAF00002528757 | fastq.gz | 3.5 GB | Report |
|
| EGAF00002528758 | fastq.gz | 3.4 GB | Report |
|
| EGAF00002528759 | fastq.gz | 3.4 GB | Report |
|
| EGAF00002528760 | fastq.gz | 3.4 GB | Report |
|
| EGAF00002528761 | fastq.gz | 3.5 GB | Report |
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| EGAF00002528762 | fastq.gz | 3.5 GB | Report |
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| EGAF00002528763 | fastq.gz | 3.5 GB | Report |
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| EGAF00002528764 | fastq.gz | 3.5 GB | Report |
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| EGAF00002528765 | fastq.gz | 3.4 GB | Report |
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| EGAF00002528766 | fastq.gz | 3.5 GB | Report |
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| EGAF00002528767 | fastq.gz | 3.5 GB | Report |
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| EGAF00002528768 | fastq.gz | 3.6 GB | Report |
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| EGAF00002528769 | fastq.gz | 3.6 GB | Report |
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| EGAF00002528770 | fastq.gz | 3.5 GB | Report |
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| EGAF00002528771 | fastq.gz | 3.6 GB | Report |
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| EGAF00002528772 | fastq.gz | 3.6 GB | Report |
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| EGAF00002528773 | fastq.gz | 3.6 GB | Report |
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| EGAF00002528774 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528775 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528776 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528777 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528778 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528779 | fastq.gz | 3.2 GB | Report |
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| EGAF00002528780 | fastq.gz | 3.0 GB | Report |
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| EGAF00002528781 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528782 | fastq.gz | 3.0 GB | Report |
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| EGAF00002528783 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528784 | fastq.gz | 3.0 GB | Report |
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| EGAF00002528785 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528786 | fastq.gz | 3.4 GB | Report |
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| EGAF00002528787 | fastq.gz | 3.3 GB | Report |
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| EGAF00002528788 | fastq.gz | 3.4 GB | Report |
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| EGAF00002528789 | fastq.gz | 3.3 GB | Report |
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| EGAF00002528790 | fastq.gz | 3.4 GB | Report |
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| EGAF00002528791 | fastq.gz | 3.3 GB | Report |
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| EGAF00002528792 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528793 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528794 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528795 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528796 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528797 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528798 | fastq.gz | 2.8 GB | Report |
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| EGAF00002528799 | fastq.gz | 2.9 GB | Report |
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| EGAF00002528800 | fastq.gz | 3.4 GB | Report |
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| EGAF00002528801 | fastq.gz | 3.5 GB | Report |
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| EGAF00002528802 | fastq.gz | 3.4 GB | Report |
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| EGAF00002528803 | fastq.gz | 3.5 GB | Report |
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| EGAF00002528804 | fastq.gz | 39.7 GB | Report |
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| EGAF00002528805 | fastq.gz | 43.5 GB | Report |
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| EGAF00002528806 | fastq.gz | 38.6 GB | Report |
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| EGAF00002528807 | fastq.gz | 41.4 GB | Report |
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| EGAF00002528808 | fastq.gz | 38.0 GB | Report |
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| EGAF00002528809 | fastq.gz | 43.3 GB | Report |
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| EGAF00002528810 | fastq.gz | 35.3 GB | Report |
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| EGAF00002528811 | fastq.gz | 39.4 GB | Report |
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| EGAF00002528812 | fastq.gz | 37.0 GB | Report |
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| EGAF00002528813 | fastq.gz | 41.1 GB | Report |
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| EGAF00002528814 | fastq.gz | 38.4 GB | Report |
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| EGAF00002528815 | fastq.gz | 43.5 GB | Report |
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| EGAF00002528816 | fastq.gz | 34.6 GB | Report |
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| EGAF00002528817 | fastq.gz | 34.9 GB | Report |
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| EGAF00002528818 | fastq.gz | 42.3 GB | Report |
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| EGAF00002528819 | fastq.gz | 48.0 GB | Report |
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| EGAF00002528820 | fastq.gz | 38.7 GB | Report |
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| EGAF00002528821 | fastq.gz | 41.7 GB | Report |
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| EGAF00002528822 | fastq.gz | 40.5 GB | Report |
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| EGAF00002528823 | fastq.gz | 45.2 GB | Report |
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| EGAF00002528824 | fastq.gz | 36.0 GB | Report |
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| EGAF00002528825 | fastq.gz | 43.8 GB | Report |
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| EGAF00002528826 | fastq.gz | 41.0 GB | Report |
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| EGAF00002528827 | fastq.gz | 45.2 GB | Report |
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| EGAF00002528828 | fastq.gz | 45.4 GB | Report |
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| EGAF00002528829 | fastq.gz | 53.5 GB | Report |
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| EGAF00002528830 | fastq.gz | 38.2 GB | Report |
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| EGAF00002528831 | fastq.gz | 43.7 GB | Report |
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| EGAF00002528832 | fastq.gz | 39.8 GB | Report |
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| EGAF00002528833 | fastq.gz | 44.8 GB | Report |
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| EGAF00002528834 | fastq.gz | 6.6 GB | Report |
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| EGAF00002528835 | fastq.gz | 7.3 GB | Report |
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| EGAF00002528836 | fastq.gz | 5.7 GB | Report |
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| EGAF00002528837 | fastq.gz | 5.8 GB | Report |
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| EGAF00002528838 | fastq.gz | 3.4 GB | Report |
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| EGAF00002528839 | fastq.gz | 1.9 GB | Report |
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| EGAF00002528840 | fastq.gz | 3.2 GB | Report |
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| EGAF00002528841 | fastq.gz | 2.2 GB | Report |
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| EGAF00002528842 | fastq.gz | 1.9 GB | Report |
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| EGAF00002528843 | fastq.gz | 2.7 GB | Report |
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| EGAF00002528844 | fastq.gz | 2.3 GB | Report |
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| EGAF00002528845 | fastq.gz | 3.1 GB | Report |
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| EGAF00002528846 | fastq.gz | 2.5 GB | Report |
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| EGAF00002528847 | fastq.gz | 2.1 GB | Report |
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| EGAF00002528848 | fastq.gz | 2.2 GB | Report |
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| EGAF00002528849 | fastq.gz | 1.9 GB | Report |
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| EGAF00002528850 | fastq.gz | 2.2 GB | Report |
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| EGAF00002528851 | fastq.gz | 2.1 GB | Report |
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| EGAF00002528852 | fastq.gz | 2.9 GB | Report |
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| EGAF00002528853 | fastq.gz | 2.0 GB | Report |
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| EGAF00002528854 | fastq.gz | 3.3 GB | Report |
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| EGAF00002528855 | fastq.gz | 1.8 GB | Report |
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| EGAF00002528856 | fastq.gz | 2.0 GB | Report |
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| EGAF00002528857 | fastq.gz | 2.9 GB | Report |
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| EGAF00002528858 | fastq.gz | 1.3 GB | Report |
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| EGAF00002528859 | fastq.gz | 1.8 GB | Report |
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| EGAF00002528860 | fastq.gz | 2.4 GB | Report |
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| EGAF00002528861 | fastq.gz | 2.3 GB | Report |
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| EGAF00002528862 | fastq.gz | 2.4 GB | Report |
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| EGAF00002528863 | fastq.gz | 4.9 GB | Report |
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| EGAF00002528864 | fastq.gz | 2.1 GB | Report |
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| EGAF00002528865 | fastq.gz | 2.2 GB | Report |
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| EGAF00002528866 | fastq.gz | 2.6 GB | Report |
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| EGAF00002528867 | fastq.gz | 5.4 GB | Report |
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| EGAF00002528868 | fastq.gz | 1.4 GB | Report |
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| EGAF00002528869 | fastq.gz | 2.3 GB | Report |
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| EGAF00002528870 | fastq.gz | 2.1 GB | Report |
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| EGAF00002528871 | fastq.gz | 2.4 GB | Report |
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| EGAF00002528872 | fastq.gz | 34.9 GB | Report |
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| EGAF00002528873 | fastq.gz | 37.6 GB | Report |
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| EGAF00002528874 | fastq.gz | 41.0 GB | Report |
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| EGAF00002528875 | fastq.gz | 45.0 GB | Report |
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| EGAF00002528876 | fastq.gz | 2.6 GB | Report |
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| EGAF00002528877 | fastq.gz | 2.4 GB | Report |
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| EGAF00002528878 | fastq.gz | 42.4 GB | Report |
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| EGAF00002528879 | fastq.gz | 46.4 GB | Report |
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| 192 Files (3.1 TB) | ||||