MMML associated cell line data

Dac ID Contact Person Email Access Information
EGAC00001000381 Omics & Datamanagment Core Facility odcf-service [at] dkfz-heidelberg [dot] de No additional information is available

This DAC controls 4 datasets:

Dataset ID Description Technology Samples
EGAD00001001468 PAR-CLIP was performed on the Argonaute-2 protein (AGO2) in four lymphoma cell lines:NamalwaRajiSU-DHL-4SU-DHL-6 Illumina HiSeq 2500 4
EGAD00001001598 RNA-sequencing data from teh hT-RPE-MycER cell line after MYC activation and after MINCR knock-down in conditions of MYC ON or OFF Illumina HiSeq 2500 18
EGAD00001001612 After overexpression and knockdown of both described novel miRs nmiR-1 and nmiR-2 in BL cell lines (SU-DHL4 for nmiR-1 and Raji for nmiR-2), we performed regular RNA-Seq (including Mock controls for all cell lines) to identify their direct and indirect downstream mRNA targets. Illumina HiSeq 2500 16
EGAD00001005504 18 WGBS lanes for 9 samples of pilocytic astrocytoma. Illumina HiSeq 2000 9