Genentech Meso DAC

Steffen Durinck
gdac-meso-d@gene.com

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Dataset ID	Description	Technology	Samples
EGAD00001001913	Exome sequencing data for Mesothelioma	Illumina HiSeq 2500	198
EGAD00001001914	RNA-seq data for mesothelioma cell lines after spliceostatin (SSA) or control (DMSO) treatment.	Illumina HiSeq 2000	12
EGAD00001001915	RNA-Seq data for Mesothelioma.	Illumina HiSeq 2000	211
EGAD00001001916	Targeted sequencing using SPET for Mesothelioma.	Illumina HiSeq 2000	207
EGAD00001001917	PacBio data for mesothelioma cell line NCI-H2595.	PacBio RS II	1
EGAD00001003919	We performed whole genome, whole or targeted exome sequencing for 289 individuals from India. This included 152 clinically diagnosed MODY and 137 control samples. Whole genome libraries were constructed using TruSeqNano DNA Library Preparation Kit (Illumina, CA) and sequenced on Illumina HiSeq2500 (Illumina, CA). The whole exome analysis was performed using Agilent SureSelect (Santa Clara, CA) Human All Exome kit v5 (50 Mb). Exome capture libraries were sequenced on HiSeq 2500 (Illumina, CA). Targeted exome sequencing was performed using custom probes corresponding to 1965 genes implicated in pancreatic cell biology and/or diabetes.	Illumina HiSeq 2500	289