1000IBD Data Access Committee UMCG

Dac ID Contact Person Email Access Information
EGAC00001000791 Melinde E. Wijers m [dot] e [dot] wijers [at] umcg [dot] nl No additional information is available

This DAC controls 11 datasets:

Dataset ID Description Technology Samples
EGAD00001003935 Sequencing of V4 hypervariable region of 16S gene of microbiota present in feces of IBD patients 315
EGAD00001003936 Sequencing of V4 hypervariable region of 16S gene from microbiota present in intestinal biopsies of IBD patients 107
EGAD00001003991 Complete clinical phenotypic description of all patients; the number listed represents all the samples linked to the 609 patients present in the dataset. Please consult the key file to visualise the sample-patient relationship 1094
EGAD00001004194 Complete Microbiome Metagenomics from feces of 461 IBD patients; The sequencer used was the Illumina HiSeq 2000 with a paired end reads design, reflected in the 2 FastQ format files per sample. Illumina HiSeq 2000 355
EGAD00001006789 eQTLsummary&GeneTable from eQTL study in 299 intestinal biopsy samples from IBD 1
EGAD00001006790 intrstinal.eQTLsummary 1
EGAD00001006791 eQTL.study.release.phenotype 1
EGAD00001006792 eQTLsummary&GeneTable 1
EGAD00001006798 eQTL.study.release.inflammation.eQTLsummary 1
EGAD00010001495 Intensity files for Immunochip genotypes from blood Illumina Immunochip 314
EGAD00010001649 This set features unfiltered, aligned, UMI-based single cell RNA sequencing count data for 5290 Blood, intraepithelial ileum (IEL) and lamina propria ileum (LPL) T cells from Crohn's disease patients as published in Uniken Venema et al, Gastroenterology 2019 Smartseq2_adapted 3