DAC
1000IBD Data Access Committee UMCG
| Dac ID | Contact Person | Access Information | |
|---|---|---|---|
| EGAC00001000791 | Melinde E. Wijers | m [dot] e [dot] wijers [at] umcg [dot] nl | No additional information is available |
This DAC controls 6 datasets:
| Dataset ID | Description | Technology | Samples |
|---|---|---|---|
| EGAD00001003935 | Sequencing of V4 hypervariable region of 16S gene of microbiota present in feces of IBD patients | 315 | |
| EGAD00001003936 | Sequencing of V4 hypervariable region of 16S gene from microbiota present in intestinal biopsies of IBD patients | 107 | |
| EGAD00001003991 | Complete clinical phenotypic description of all patients; the number listed represents all the samples linked to the 609 patients present in the dataset. Please consult the key file to visualise the sample-patient relationship | 1094 | |
| EGAD00001004194 | Complete Microbiome Metagenomics from feces of 461 IBD patients; The sequencer used was the Illumina HiSeq 2000 with a paired end reads design, reflected in the 2 FastQ format files per sample. | Illumina HiSeq 2000 | 355 |
| EGAD00010001495 | Intensity files for Immunochip genotypes from blood | Illumina Immunochip | 314 |
| EGAD00010001649 | This set features unfiltered, aligned, UMI-based single cell RNA sequencing count data for 5290 Blood, intraepithelial ileum (IEL) and lamina propria ileum (LPL) T cells from Crohn's disease patients as published in Uniken Venema et al, Gastroenterology 2019 | Smartseq2_adapted | 3 |
