DAC

PELICAN Integrated Clinical-Molecular Autopsy Study of lethal Prostate Cancer Data Access Committee

Dac ID Contact Person Email Access Information
EGAC00001001309 George S. Bova steve [dot] bova [at] tuni [dot] fi No additional information is available

This DAC controls 3 datasets:

Dataset ID Description Technology Samples
EGAD00001005381 Woodcock et al TenMenDeep EGA Dataset A. These are Illumina based deep sequencing data based on bait capture sequencing. See Woodcock et al methods for more detail. Note: the Amplicon sequencing data type is selected because the EGA Website currently has no option to select Bait Capture Sequencing or similar. Illumina HiSeq 2500 117
EGAD00001005382 Woodcock et al TenMenDeep EGA Dataset B. These are Illumina based deep sequencing data based on bait capture sequencing. See Woodcock et al methods for more detail. Note: the Amplicon sequencing data type is selected because the EGA Website currently has no option to select Bait Capture Sequencing or similar. Illumina HiSeq 2500 33
EGAD00001005974 Oxford Nanopore long-read sequencing of A17-LAxillaryLN2Met-23312 PELICAN sample, identified as D051965 un Pan-Cancer Analysis of Whole Genomes study, and identified as PD13412a by prior Gundem et al whole genome sequencing study (PMID 25830880). Data used to support Figure 6 in Pubmed ID 32025007 "Pan-Cancer Analysis of Whole Genomes Consortium." Nature 2020 578:8293. PromethION 1