Department of Oncology at IRCCS Istituto di Ricerche Farmacologiche "Mario Negri"

Maurizio D'Incalci
maurizio.dincalci@marionegri.it

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Dataset ID	Description	Technology	Samples
EGAD00001006873	BAM files (aligned against the hg38 genome) from a targeted amplicon sequencing (139 genes) experiment (median depth 1000X) on 218 samples from Stage 1 epithelial ovarian cancer biopises. Samples labeled "bis" or "tris" with the same ID are relapses; "left" or "right" samples indicate, in the case of bilateral tumor, from which ovary the sample was taken.	NextSeq 500	218
EGAD00001006881	BAM files (aligned against the hg38 genome) from a shallow whole-genome sequencing experiment (median depth 0.5X) on 218 samples from Stage 1 epithelial ovarian cancer biopises. Samples labeled "bis" or "tris" with the same ID are relapses; "left" or "right" samples indicate, in the case of bilateral tumor, from which ovary the sample was taken.	NextSeq 500	218