DAC

Department of Oncology at IRCCS Istituto di Ricerche Farmacologiche "Mario Negri"

Dac ID Contact Person Email Access Information
EGAC00001001912 Maurizio D'Incalci maurizio [dot] dincalci [at] marionegri [dot] it No additional information is available

This DAC controls 2 datasets:

Dataset ID Description Technology Samples
EGAD00001006873 BAM files (aligned against the hg38 genome) from a targeted amplicon sequencing (139 genes) experiment (median depth 1000X) on 218 samples from Stage 1 epithelial ovarian cancer biopises. Samples labeled "bis" or "tris" with the same ID are relapses; "left" or "right" samples indicate, in the case of bilateral tumor, from which ovary the sample was taken. NextSeq 500 218
EGAD00001006881 BAM files (aligned against the hg38 genome) from a shallow whole-genome sequencing experiment (median depth 0.5X) on 218 samples from Stage 1 epithelial ovarian cancer biopises. Samples labeled "bis" or "tris" with the same ID are relapses; "left" or "right" samples indicate, in the case of bilateral tumor, from which ovary the sample was taken. NextSeq 500 218