Shallow whole genome sequencing on stage 1 epithelial ovarian cancer

BAM files (aligned against the hg38 genome) from a shallow whole-genome sequencing experiment (median depth 0.5X) on 218 samples from Stage 1 epithelial ovarian cancer biopises. Samples labeled "bis" or "tris" with the same ID are relapses; "left" or "right" samples indicate, in the case of bilateral tumor, from which ovary the sample was taken.

218 samples
DAC: EGAC00001001912
Technology: NextSeq 500

Access Policy1 Study Files

Metadata

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Please contact Maurizio D'Incalci if you need access to the data.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001004961	Copy number and mutation profiling of Stage 1 epithelial ovarian cancer biopsies	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00004973173	bam	1.1 GB
EGAF00004973174	bam	2.0 GB
EGAF00004973175	bam	1.3 GB
EGAF00004973176	bam	2.3 GB
EGAF00004973177	bam	1.4 GB
EGAF00004973178	bam	1.6 GB
EGAF00004973179	bam	1.4 GB
EGAF00004973180	bam	1.2 GB
EGAF00004973181	bam	1.5 GB
EGAF00004973182	bam	1.2 GB
EGAF00004973183	bam	1.6 GB
EGAF00004973184	bam	996.4 MB
EGAF00004973185	bam	1.9 GB
EGAF00004973186	bam	1.9 GB
EGAF00004973187	bam	756.3 MB
EGAF00004973188	bam	1.0 GB
EGAF00004973189	bam	1.7 GB
EGAF00004973190	bam	1.6 GB
EGAF00004973191	bam	1.5 GB
EGAF00004973192	bam	1.6 GB
EGAF00004973193	bam	2.5 GB
EGAF00004973194	bam	1.7 GB
EGAF00004973195	bam	1.5 GB
EGAF00004973196	bam	1.7 GB
EGAF00004973197	bam	1.4 GB
EGAF00004973198	bam	1.2 GB
EGAF00004973199	bam	1.9 GB
EGAF00004973200	bam	1.9 GB
EGAF00004973201	bam	1.4 GB
EGAF00004973202	bam	1.8 GB
EGAF00004973203	bam	1.2 GB
EGAF00004973204	bam	1.7 GB
EGAF00004973205	bam	1.5 GB
EGAF00004973206	bam	1.5 GB
EGAF00004973207	bam	1.4 GB
EGAF00004973208	bam	1.5 GB
EGAF00004973209	bam	1.6 GB
EGAF00004973210	bam	730.9 MB
EGAF00004973211	bam	1.1 GB
EGAF00004973212	bam	1.6 GB
EGAF00004973213	bam	1.2 GB
EGAF00004973214	bam	1.4 GB
EGAF00004973215	bam	1.6 GB
EGAF00004973216	bam	723.5 MB
EGAF00004973217	bam	1.1 GB
EGAF00004973218	bam	1.5 GB
EGAF00004973219	bam	1.8 GB
EGAF00004973220	bam	1.3 GB
EGAF00004973221	bam	1.9 GB
EGAF00004973222	bam	1.4 GB
EGAF00004973223	bam	2.0 GB
EGAF00004973224	bam	1.4 GB
EGAF00004973225	bam	1.5 GB
EGAF00004973226	bam	1.7 GB
EGAF00004973227	bam	1.3 GB
EGAF00004973228	bam	1.5 GB
EGAF00004973229	bam	738.8 MB
EGAF00004973230	bam	1.5 GB
EGAF00004973231	bam	1.5 GB
EGAF00004973232	bam	1.6 GB
EGAF00004973233	bam	1.6 GB
EGAF00004973234	bam	268.2 MB
EGAF00004973235	bam	1.6 GB
EGAF00004973236	bam	1.9 GB
EGAF00004973237	bam	1.9 GB
EGAF00004973238	bam	1.6 GB
EGAF00004973239	bam	1.2 GB
EGAF00004973240	bam	1.1 GB
EGAF00004973241	bam	1.5 GB
EGAF00004973242	bam	2.0 GB
EGAF00004973243	bam	1.4 GB
EGAF00004973244	bam	1.5 GB
EGAF00004973245	bam	1.2 GB
EGAF00004973246	bam	1.6 GB
EGAF00004973247	bam	1.5 GB
EGAF00004973248	bam	1.1 GB
EGAF00004973249	bam	1.6 GB
EGAF00004973250	bam	1.4 GB
EGAF00004973251	bam	1.2 GB
EGAF00004973252	bam	2.0 GB
EGAF00004973253	bam	1.6 GB
EGAF00004973254	bam	1.9 GB
EGAF00004973255	bam	1.1 GB
EGAF00004973256	bam	2.0 GB
EGAF00004973257	bam	1.3 GB
EGAF00004973258	bam	1.1 GB
EGAF00004973259	bam	1.6 GB
EGAF00004973260	bam	762.0 MB
EGAF00004973261	bam	2.0 GB
EGAF00004973262	bam	1.6 GB
EGAF00004973263	bam	868.2 MB
EGAF00004973264	bam	2.3 GB
EGAF00004973265	bam	1.3 GB
EGAF00004973266	bam	1.6 GB
EGAF00004973267	bam	1.6 GB
EGAF00004973268	bam	1.9 GB
EGAF00004973269	bam	1.3 GB
EGAF00004973270	bam	1.4 GB
EGAF00004973271	bam	1.8 GB
EGAF00004973272	bam	1.5 GB
EGAF00004973273	bam	1.6 GB
EGAF00004973274	bam	1.1 GB
EGAF00004973275	bam	1.4 GB
EGAF00004973276	bam	1.4 GB
EGAF00004973277	bam	1.5 GB
EGAF00004973278	bam	1.5 GB
EGAF00004973279	bam	1.2 GB
EGAF00004973280	bam	1.6 GB
EGAF00004973281	bam	1.6 GB
EGAF00004973282	bam	1.1 GB
EGAF00004973283	bam	1.7 GB
EGAF00004973284	bam	1.2 GB
EGAF00004973285	bam	1.4 GB
EGAF00004973286	bam	950.0 MB
EGAF00004973287	bam	1.5 GB
EGAF00004973288	bam	1.3 GB
EGAF00004973289	bam	1.2 GB
EGAF00004973290	bam	1.4 GB
EGAF00004973291	bam	1.4 GB
EGAF00004973292	bam	1.0 GB
EGAF00004973293	bam	666.1 MB
EGAF00004973294	bam	1.3 GB
EGAF00004973295	bam	1.6 GB
EGAF00004973296	bam	2.1 GB
EGAF00004973297	bam	1.7 GB
EGAF00004973298	bam	845.4 MB
EGAF00004973299	bam	1.5 GB
EGAF00004973300	bam	1.6 GB
EGAF00004973301	bam	1.6 GB
EGAF00004973302	bam	1.4 GB
EGAF00004973303	bam	1.2 GB
EGAF00004973304	bam	1.4 GB
EGAF00004973305	bam	2.0 GB
EGAF00004973306	bam	1.5 GB
EGAF00004973307	bam	1.1 GB
EGAF00004973308	bam	1.4 GB
EGAF00004973309	bam	1.9 GB
EGAF00004973310	bam	1.1 GB
EGAF00004973311	bam	1.5 GB
EGAF00004973312	bam	1.6 GB
EGAF00004973313	bam	1.5 GB
EGAF00004973314	bam	1.5 GB
EGAF00004973315	bam	1.8 GB
EGAF00004973316	bam	1.5 GB
EGAF00004973317	bam	1.6 GB
EGAF00004973318	bam	795.8 MB
EGAF00004973319	bam	1.0 GB
EGAF00004973320	bam	1.5 GB
EGAF00004973321	bam	1.7 GB
EGAF00004973322	bam	1.5 GB
EGAF00004973323	bam	1.5 GB
EGAF00004973324	bam	1.6 GB
EGAF00004973325	bam	1.6 GB
EGAF00004973326	bam	1.5 GB
EGAF00004973327	bam	1.7 GB
EGAF00004973328	bam	1.4 GB
EGAF00004973329	bam	1.3 GB
EGAF00004973330	bam	1.8 GB
EGAF00004973331	bam	1.9 GB
EGAF00004973332	bam	1.4 GB
EGAF00004973333	bam	1.5 GB
EGAF00004973334	bam	1.8 GB
EGAF00004973335	bam	1.7 GB
EGAF00004973336	bam	1.8 GB
EGAF00004973337	bam	1.9 GB
EGAF00004973338	bam	1.8 GB
EGAF00004973339	bam	1.6 GB
EGAF00004973340	bam	1.5 GB
EGAF00004973341	bam	1.4 GB
EGAF00004973342	bam	1.6 GB
EGAF00004973343	bam	1.4 GB
EGAF00004973344	bam	1.6 GB
EGAF00004973668	bam	2.4 GB
EGAF00004973669	bam	1.6 GB
EGAF00004973670	bam	1.8 GB
EGAF00004973671	bam	1.8 GB
EGAF00004973672	bam	1.5 GB
EGAF00004973673	bam	1.9 GB
EGAF00004973674	bam	1.8 GB
EGAF00004973675	bam	1.8 GB
EGAF00004973676	bam	1.6 GB
EGAF00004973677	bam	1.0 GB
EGAF00004973678	bam	1.6 GB
EGAF00004973679	bam	1.1 GB
EGAF00004973680	bam	1.8 GB
EGAF00004973681	bam	1.6 GB
EGAF00004973682	bam	1.8 GB
EGAF00004973683	bam	1.9 GB
EGAF00004973684	bam	1.8 GB
EGAF00004973685	bam	1.7 GB
EGAF00004973686	bam	1.6 GB
EGAF00004973687	bam	1.3 GB
EGAF00004973688	bam	1.5 GB
EGAF00004973689	bam	1.6 GB
EGAF00004973690	bam	1.6 GB
EGAF00004973691	bam	1.7 GB
EGAF00004973692	bam	1.6 GB
EGAF00004973693	bam	1.7 GB
EGAF00004973694	bam	1.4 GB
EGAF00004973695	bam	1.6 GB
EGAF00004973696	bam	1.5 GB
EGAF00004973697	bam	1.3 GB
EGAF00004973698	bam	1.2 GB
EGAF00004973699	bam	1.3 GB
EGAF00004973700	bam	1.3 GB
EGAF00004973701	bam	1.7 GB
EGAF00004973702	bam	1.7 GB
EGAF00004973703	bam	1.6 GB
EGAF00004973704	bam	1.4 GB
EGAF00004973705	bam	1.6 GB
EGAF00004973706	bam	1.7 GB
EGAF00004973707	bam	1.9 GB
EGAF00004973708	bam	1.8 GB
EGAF00004973709	bam	1.9 GB
EGAF00004973710	bam	1.6 GB
EGAF00004973711	bam	1.6 GB
EGAF00004973712	bam	1.8 GB
EGAF00004973713	bam	1.4 GB
218 Files (327.8 GB)