Breast Cancer Single-Cell Data Access Committee

a.swarbrick@garvan.org.au

Request Access

Dataset ID	Description	Technology	Samples
EGAD00001006981	Single-cell RNA-Sequencing of five TNBC primary breast cancers from Wu et al. (2020) EMBO J study. Data was generated using the Chromium controller (10X Genomics) and sequenced on the NextSeq 500 platform.	NextSeq 500	5
EGAD00001007030	Single-cell RNA-Sequencing of three primary breast cancers, two primary prostate cancers, and a metastatic melanoma sample from Wu et al. (2021) Genome Medicine study. Each tumour was sequenced across different cryopreservation conditions including Fresh Tissue (FT), cryopreserved single-cell suspensions (CCS), cryopreserved solid tissue fragments (CT) and a cryopreserved after overnight cold storage (CO). Data was generated using the Chromium controller (10X Genomics) and sequenced on the NextSeq platform.	NextSeq 550	18
EGAD00001007495	Single-cell RNA-Sequencing of 26 primary breast cancers from Wu et al. (2021) study. Data was generated using the Chromium controller (10X Genomics) and sequenced on the NextSeq 500 platform.	NextSeq 500	26
EGAD50000000649	Bulk RNA-Sequencing of 18 primary breast cancers from Wu et al. (2021) study.	Illumina HiSeq 2000	24