IDIBELL CRC DAC

Dr Victor Moreno
v.moreno@iconcologia.net

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Dataset ID	Description	Technology	Samples
EGAD00001004826	This dataset consists of Illumina HiSeq 2000 Whole Exome Sequencing of 84 colorectal samples: 42 Tumor tissue samples and 42 Normal tissue samples (adjacent to tumor sites). 2x75bp paired-end sequencing reads: 2 fastq files per sample	Illumina HiSeq 2000	84
EGAD00001004827	This dataset consists of SOLiD small RNA-seq of 250 colorectal samples: 100 tumor tissue samples, 100 normal tissue samples (adjacent to tumor sites) and 50 matched control samples of healthy individuals. CSfasta and qual files converted to single fastq files prior to uploading.	AB SOLiD System	250
EGAD00001007690	ATAC-seq	unspecified	6
EGAD00001007707	This dataset includes ChIP-seq data for H3K27ac and H3K4me1 on 20 paired samples of colorectal cancer and adjacent normal mucosa. One tumor sample that failed QC is not available.	Illumina HiSeq 2500	39
EGAD00001010068	156 samples of shot-gun gut metagenomics, corresponding to 51 patients with CRCm 54 patients with adenoma, and 51 healthy controls	Illumina HiSeq 4000	2