Singapore Gastric Cancer Consortium Data Access Committee

Patrick Tan
gmstanp@duke-nus.edu.sg

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Dataset ID	Description	Technology	Samples
EGAD00001015433	The GASCAD-II dataset from the Singapore Gastric Cancer Consortium includes paired tumor-blood whole exome sequencing data for 209 gastric cancer (GC) patients, along with whole transcriptome sequencing data for 125 GC samples. Whole exome sequencing was conducted using Agilent SureSelect Human All Exon V6 kits. For RNA sequencing, total RNA was isolated using the RNeasy Mini Kit, and libraries were prepared with the TruSeq Stranded Total RNA with Ribo-Zero Gold protocol (Illumina). Aligned BAM files for both exome and RNAseq data are included in this dataset	Illumina NovaSeq 6000	1
EGAD50000000715	Whole exome sequencing of 66 gastric samples and whole transcriptome sequencing of 191 gastric samples.	Illumina HiSeq 4000	257