Single-nucleus transcriptomic profiling of aging Down Syndrome brains

Jerold Chun
jchun@sbpdiscovery.org

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Dataset ID	Description	Technology	Samples
EGAD00001008284	16 DS and Control brain samples were prepared using the 10X Single Cell 3' v3 kit. Pre-fragmented libraries were selectively amplified for APP using custom designed primers.	Sequel	16
EGAD00001008285	16 DS and Control brain samples were prepared using the 10X Single Cell 3' v3 kit. Pre-fragmented libraries were selectively amplified for SPP1 using custom designed primers.	Sequel	16
EGAD00001008286	16 DS and Control brains samples were prepared using the 10X Genomics Single Cell 3' v3 kit. Pre-fragmented cDNA libraries were loaded onto a Pacific Biosciences Sequel II to sequence single-nucleus isoforms.	Sequel	16
EGAD00001008287	29 DS and Control brain samples were prepared using the 10X Genomics Single Cell 3' v3 kit. The cDNA libraries were sequenced on an Illumina Novaseq 6000.	Illumina NovaSeq 6000	29
EGAD00001008288	16 DS and Control brain samples were prepared using the 10X Single Cell 3' v3 kit. Pre-fragmented libraries were selectively amplified for BIN1 using custom designed primers.	Sequel	16