DAC FSHD-group LUMC

Silvere van der Maarel
s.m.van_der_maarel@lumc.nl

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Dataset ID	Description	Technology	Samples
EGAD00001008337	This project includes RNA-sequencing data from human FSHD and control skeletal muscle biopsies. This project includes data from 28 FSHD patients (total 37 samples, including vastus lateralis and tibialis anterior muscles) and 12 control individuals (total 24 samples, including vastus lateralis and tibialis anterior muscles).	Illumina HiSeq 4000 Illumina NovaSeq 6000 NextSeq 500	65
EGAD50000000207	snRNA-sequencing data from 3 FSHD and 1 control multinucleated myotube cell cultures	Illumina NovaSeq 6000	4
EGAD50000000717	The dataset includes the RNA-seq on the 2D cell culture of primary myoblast cell lines derived from FSHD patients and healthy donors (n=3 in each condition) and on the 3D muscle bundles generated by the human iPSCs derived from healthy and FSHD-affected cells of mosaic FSHD patients (n=3 in each condition)	Illumina NovaSeq 6000	12
EGAD50000000718	The dataset includes the PacBio full-length isoform sequencing data of DUX4i myoblasts (Clone-5) with and without 16-hour DOX-treatment (referred to as DUX4- and DUX4+; n=1 in each condition).	Sequel II	2
EGAD50000000719	The dataset includes the short-read RNA sequencing data of DUX4i myoblasts (Clone-5 and Clone-7) with and without 16-hour DOX-treatment (n=1 in each condition).	Illumina NovaSeq 6000	4