Pan Prostate Cancer Group Data Access Control Committee

Alison Thwaites
ppcg@icr.ac.uk

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Dataset ID	Description	Technology	Samples
EGAD00001004182	The total of 381 samples consist of 158 primary tumour samples, 46 metastasis samples and 177 whole blood samples. All sequencing was carried out on illumina HiSeq X Ten or HiSeq 2000 systems and were mapped to hg19 using BWA. The resulting BAM files were sorted by Samtools.	HiSeq X Ten	381
EGAD00001005997	German early-onset prostate cancer whole-genome sequencing samples of the Pan-Prostate Cancer Genome (PPCG) project. Whole Genome Sequencing Illumina data from men with prostate cancer. Samples were taken from primary tissue obtained at prostatectomy with matched blood control.		577
EGAD00001006742	Pan Prostate Cancer Group UK BAM files. Whole Genome Sequencing Illumina HiSeq data from men with prostate cancer aligned to GRCh37. Samples were taken from primary tissue obtained at prostatectomy (target sequencing depth 50X) with matched blood control (target sequencing depth 30X).		561