Data access committee for sequencing data at Kyoto University

Dr Nobuyuki Kakiuchi
kakiuchi@kuhp.kyoto-u.ac.jp

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Dataset ID	Description	Technology	Samples
EGAD50000000079	387 swab samples were sequenced. The bam files contain consensus reads.	DNBSEQ-G400	387
EGAD50000000080	40 buccal mucosa samples and a paired blood sample were whole-exome sequenced.	DNBSEQ-G400	41
EGAD50000000641	An additional 320 swab samples were sequenced. The bam files contain consensus reads.	DNBSEQ-G400	320
EGAD50000000998	Buccal samples and paired esophageal epithelium were obtained using the three sizes of swabs and endoscopic biopsy, respectively. Forty samples from 10 subjects were analyzed via duplex sequencing. This dataset contains bam files that were mapped to the GRCh37 reference genome.	DNBSEQ-G400	40
EGAD50000000999	16 buccal swab samples were analyzed by Nanoseq. S3 in the file names indicates 28 mm^2 swab size, and S5 indicates 254 mm^2 swab size. We analyzed 28 mm^2 swab samples using paired 254 mm^2 swab samples as controls. The files were generated by the Nanoseq pipeline using GRCh37 as the reference genome.	DNBSEQ-G400	32