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Error-corrected sequencing of 26 driver genes (additional cohort)

An additional 320 swab samples were sequenced. The bam files contain consensus reads.

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Data Access Agreement

DATA ACCESS AGREEMENT These terms and conditions govern access to the managed access datasets (details of which are set out in Appendix I) to which the User Institution has requested access. The User Institution agrees to be bound by these terms and conditions. Definitions Authorised Personnel: The individuals at the User Institution to whom Kyoto University grants access to the Data. This includes the User, the individuals listed in Appendix II and any other individuals for whom the User Institution subsequently requests access to the Data. Details of the initial Authorised Personnel are set out in Appendix II. Data: The managed access datasets to which the User Institution has requested access. Data Producers: Kyoto University and the collaborators listed in Appendix I responsible for the development, organisation, and oversight of these Data. External Collaborator: A collaborator of the User, working for an institution other than the User Institution. Project: The project for which the User Institution has requested access to these Data. A description of the Project is set out in Appendix II. Publications: Includes, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. Research Participant: An individual whose data form part of these Data. Research Purposes: Shall mean research that is seeking to advance the understanding of genetics and genomics, including the treatment of disorders, and work on statistical methods that may be applied to such research. User: The principal investigator for the Project. User Institution(s): The Institution that has requested access to the Data. Kyoto University: Department of Pathology and Tumor Biology, Kyoto University. 1. The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect these Data. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees to follow the Fort Lauderdale Guidelines (http://www.wellcome.ac.uk/stellent/groups/corporatesite/@policy_communications/documents/web_document/wtd003207.pdf ) and the Toronto Statement (http://www.nature.com/nature/journal/v461/n7261/full/461168a.html). This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005) (https://www.icgc.org/files/daco/NIH_BestPracticesLicensingGenomicInventions_2005_en.pdf ) in conformity with the Organisation for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) (http://www.oecd.org/science/biotech/36198812.pdf ). 11. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 12. The User Institution will notify Kyoto University within 30 days of any changes or departures of Authorised Personnel. 13. The User Institution will notify Kyoto University prior to any significant changes to the protocol for the Project. 14. The User Institution will notify Kyoto University as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. Kyoto University may terminate this agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. As an example, this may include specific provisions relating to the Data required by Data Producers other than Kyoto University. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement. 19. This agreement (and any dispute, controversy, proceedings or claim of whatever nature arising out of this agreement or its formation) shall be construed, interpreted and governed by the laws of Japan and shall be subject to the exclusive jurisdiction of the Japanese courts.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000443 Exome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000151814 bam 546.1 MB
EGAF50000151815 bam 569.3 MB
EGAF50000151816 bam 559.3 MB
EGAF50000151817 bam 558.9 MB
EGAF50000151818 bam 587.7 MB
EGAF50000151819 bam 584.4 MB
EGAF50000151820 bam 544.7 MB
EGAF50000151821 bam 649.8 MB
EGAF50000151822 bam 601.8 MB
EGAF50000151823 bam 573.1 MB
EGAF50000151824 bam 527.1 MB
EGAF50000151825 bam 531.9 MB
EGAF50000151826 bam 584.4 MB
EGAF50000151827 bam 627.1 MB
EGAF50000151828 bam 581.0 MB
EGAF50000151829 bam 657.4 MB
EGAF50000151830 bam 541.0 MB
EGAF50000151831 bam 569.0 MB
EGAF50000151832 bam 660.9 MB
EGAF50000151833 bam 534.8 MB
EGAF50000151834 bam 686.1 MB
EGAF50000151835 bam 529.8 MB
EGAF50000151836 bam 564.6 MB
EGAF50000151837 bam 564.8 MB
EGAF50000151838 bam 670.1 MB
EGAF50000151839 bam 532.5 MB
EGAF50000151840 bam 627.9 MB
EGAF50000151841 bam 619.2 MB
EGAF50000151842 bam 565.6 MB
EGAF50000151843 bam 661.6 MB
EGAF50000151844 bam 552.0 MB
EGAF50000151845 bam 576.7 MB
EGAF50000151846 bam 696.2 MB
EGAF50000151847 bam 520.4 MB
EGAF50000151848 bam 540.3 MB
EGAF50000151849 bam 531.6 MB
EGAF50000151850 bam 579.1 MB
EGAF50000151851 bam 594.4 MB
EGAF50000151852 bam 619.9 MB
EGAF50000151853 bam 657.3 MB
EGAF50000151854 bam 600.9 MB
EGAF50000151855 bam 688.5 MB
EGAF50000151856 bam 568.0 MB
EGAF50000151857 bam 592.3 MB
EGAF50000151858 bam 546.6 MB
EGAF50000151859 bam 696.9 MB
EGAF50000151860 bam 611.6 MB
EGAF50000151861 bam 616.8 MB
EGAF50000151862 bam 575.7 MB
EGAF50000151863 bam 726.4 MB
EGAF50000151864 bam 652.1 MB
EGAF50000151865 bam 680.6 MB
EGAF50000151866 bam 709.3 MB
EGAF50000151867 bam 732.7 MB
EGAF50000151868 bam 690.4 MB
EGAF50000151869 bam 726.3 MB
EGAF50000151870 bam 694.2 MB
EGAF50000151871 bam 619.9 MB
EGAF50000151872 bam 738.8 MB
EGAF50000151873 bam 739.3 MB
EGAF50000151874 bam 707.7 MB
EGAF50000151875 bam 623.5 MB
EGAF50000151876 bam 633.7 MB
EGAF50000151877 bam 627.9 MB
EGAF50000151878 bam 708.6 MB
EGAF50000151879 bam 716.1 MB
EGAF50000151880 bam 664.5 MB
EGAF50000151881 bam 735.1 MB
EGAF50000151882 bam 634.7 MB
EGAF50000151883 bam 727.5 MB
EGAF50000151884 bam 752.3 MB
EGAF50000151885 bam 649.9 MB
EGAF50000151886 bam 613.0 MB
EGAF50000151887 bam 586.4 MB
EGAF50000151888 bam 610.9 MB
EGAF50000151889 bam 610.2 MB
EGAF50000151890 bam 680.6 MB
EGAF50000151891 bam 676.3 MB
EGAF50000151892 bam 648.3 MB
EGAF50000151893 bam 617.1 MB
EGAF50000151894 bam 648.9 MB
EGAF50000151895 bam 645.7 MB
EGAF50000151896 bam 571.6 MB
EGAF50000151897 bam 594.6 MB
EGAF50000151898 bam 571.8 MB
EGAF50000151899 bam 546.0 MB
EGAF50000151900 bam 650.6 MB
EGAF50000151901 bam 539.6 MB
EGAF50000151902 bam 565.9 MB
EGAF50000151903 bam 562.8 MB
EGAF50000151904 bam 532.1 MB
EGAF50000151905 bam 723.6 MB
EGAF50000151906 bam 676.6 MB
EGAF50000151907 bam 614.1 MB
EGAF50000151908 bam 476.9 MB
EGAF50000151909 bam 616.1 MB
EGAF50000151910 bam 664.7 MB
EGAF50000151911 bam 689.1 MB
EGAF50000151912 bam 692.0 MB
EGAF50000151913 bam 680.3 MB
EGAF50000151914 bam 615.7 MB
EGAF50000151915 bam 606.3 MB
EGAF50000151916 bam 634.6 MB
EGAF50000151917 bam 545.9 MB
EGAF50000151918 bam 624.5 MB
EGAF50000151919 bam 654.5 MB
EGAF50000151920 bam 669.1 MB
EGAF50000151921 bam 647.9 MB
EGAF50000151922 bam 615.6 MB
EGAF50000151923 bam 677.7 MB
EGAF50000151924 bam 570.6 MB
EGAF50000151925 bam 600.0 MB
EGAF50000151926 bam 704.7 MB
EGAF50000151927 bam 692.1 MB
EGAF50000151928 bam 613.1 MB
EGAF50000151929 bam 657.3 MB
EGAF50000151930 bam 710.6 MB
EGAF50000151931 bam 584.7 MB
EGAF50000151932 bam 595.8 MB
EGAF50000151933 bam 598.3 MB
EGAF50000151934 bam 566.6 MB
EGAF50000151935 bam 720.8 MB
EGAF50000151936 bam 563.8 MB
EGAF50000151937 bam 543.5 MB
EGAF50000151938 bam 577.4 MB
EGAF50000151939 bam 568.9 MB
EGAF50000151940 bam 688.9 MB
EGAF50000151941 bam 669.3 MB
EGAF50000151942 bam 568.9 MB
EGAF50000151943 bam 579.2 MB
EGAF50000151944 bam 514.4 MB
EGAF50000151945 bam 617.4 MB
EGAF50000151946 bam 559.9 MB
EGAF50000151947 bam 569.4 MB
EGAF50000151948 bam 608.6 MB
EGAF50000151949 bam 569.1 MB
EGAF50000151950 bam 710.9 MB
EGAF50000151951 bam 804.5 MB
EGAF50000151952 bam 722.6 MB
EGAF50000151953 bam 692.6 MB
EGAF50000151954 bam 726.5 MB
EGAF50000151955 bam 684.8 MB
EGAF50000151956 bam 843.2 MB
EGAF50000151957 bam 733.9 MB
EGAF50000151958 bam 740.6 MB
EGAF50000151959 bam 777.6 MB
EGAF50000151960 bam 747.3 MB
EGAF50000151961 bam 698.5 MB
EGAF50000151962 bam 699.1 MB
EGAF50000151963 bam 719.3 MB
EGAF50000151964 bam 835.6 MB
EGAF50000151965 bam 709.9 MB
EGAF50000151966 bam 808.3 MB
EGAF50000151967 bam 715.8 MB
EGAF50000151968 bam 698.2 MB
EGAF50000151969 bam 930.1 MB
EGAF50000151970 bam 670.6 MB
EGAF50000151971 bam 571.6 MB
EGAF50000151972 bam 614.1 MB
EGAF50000151973 bam 547.9 MB
EGAF50000151974 bam 547.5 MB
EGAF50000151975 bam 563.0 MB
EGAF50000151976 bam 589.5 MB
EGAF50000151977 bam 562.4 MB
EGAF50000151978 bam 700.1 MB
EGAF50000151979 bam 650.1 MB
EGAF50000151980 bam 562.9 MB
EGAF50000151981 bam 446.7 MB
EGAF50000151982 bam 584.4 MB
EGAF50000151983 bam 545.1 MB
EGAF50000151984 bam 535.2 MB
EGAF50000151985 bam 592.2 MB
EGAF50000151986 bam 569.7 MB
EGAF50000151987 bam 569.5 MB
EGAF50000151988 bam 545.0 MB
EGAF50000151989 bam 548.5 MB
EGAF50000151990 bam 568.0 MB
EGAF50000151991 bam 627.5 MB
EGAF50000151992 bam 589.0 MB
EGAF50000151993 bam 572.0 MB
EGAF50000151994 bam 691.3 MB
EGAF50000151995 bam 699.6 MB
EGAF50000151996 bam 605.3 MB
EGAF50000151997 bam 611.5 MB
EGAF50000151998 bam 652.6 MB
EGAF50000151999 bam 649.7 MB
EGAF50000152000 bam 671.1 MB
EGAF50000152001 bam 620.8 MB
EGAF50000152002 bam 597.9 MB
EGAF50000152003 bam 585.6 MB
EGAF50000152004 bam 715.6 MB
EGAF50000152005 bam 734.5 MB
EGAF50000152006 bam 643.3 MB
EGAF50000152007 bam 673.6 MB
EGAF50000152008 bam 555.5 MB
EGAF50000152009 bam 681.9 MB
EGAF50000152010 bam 651.7 MB
EGAF50000152011 bam 721.0 MB
EGAF50000152012 bam 875.0 MB
EGAF50000152013 bam 827.3 MB
EGAF50000152014 bam 841.5 MB
EGAF50000152015 bam 846.5 MB
EGAF50000152016 bam 703.4 MB
EGAF50000152017 bam 701.2 MB
EGAF50000152018 bam 591.4 MB
EGAF50000152019 bam 676.7 MB
EGAF50000152020 bam 690.1 MB
EGAF50000152021 bam 687.8 MB
EGAF50000152022 bam 614.1 MB
EGAF50000152023 bam 582.1 MB
EGAF50000152024 bam 634.5 MB
EGAF50000152025 bam 685.4 MB
EGAF50000152026 bam 593.8 MB
EGAF50000152027 bam 564.3 MB
EGAF50000152028 bam 592.1 MB
EGAF50000152029 bam 642.2 MB
EGAF50000152030 bam 558.2 MB
EGAF50000152031 bam 640.0 MB
EGAF50000152032 bam 627.6 MB
EGAF50000152033 bam 689.2 MB
EGAF50000152034 bam 692.2 MB
EGAF50000152035 bam 621.7 MB
EGAF50000152036 bam 573.3 MB
EGAF50000152037 bam 600.5 MB
EGAF50000152038 bam 682.5 MB
EGAF50000152039 bam 635.3 MB
EGAF50000152040 bam 748.0 MB
EGAF50000152041 bam 697.6 MB
EGAF50000152042 bam 611.6 MB
EGAF50000152043 bam 604.7 MB
EGAF50000152044 bam 649.4 MB
EGAF50000152045 bam 678.3 MB
EGAF50000152046 bam 806.9 MB
EGAF50000152047 bam 801.8 MB
EGAF50000152048 bam 517.5 MB
EGAF50000152049 bam 597.3 MB
EGAF50000152050 bam 657.1 MB
EGAF50000152051 bam 642.5 MB
EGAF50000152052 bam 667.6 MB
EGAF50000152053 bam 602.7 MB
EGAF50000152054 bam 532.4 MB
EGAF50000152055 bam 646.1 MB
EGAF50000152056 bam 687.7 MB
EGAF50000152057 bam 529.7 MB
EGAF50000152058 bam 549.5 MB
EGAF50000152059 bam 668.0 MB
EGAF50000152060 bam 611.8 MB
EGAF50000152061 bam 571.9 MB
EGAF50000152062 bam 627.8 MB
EGAF50000152063 bam 607.5 MB
EGAF50000152064 bam 583.1 MB
EGAF50000152065 bam 713.4 MB
EGAF50000152066 bam 683.9 MB
EGAF50000152067 bam 602.9 MB
EGAF50000152068 bam 641.9 MB
EGAF50000152069 bam 684.2 MB
EGAF50000152070 bam 625.4 MB
EGAF50000152071 bam 719.4 MB
EGAF50000152072 bam 570.9 MB
EGAF50000152073 bam 577.4 MB
EGAF50000152074 bam 635.6 MB
EGAF50000152075 bam 605.4 MB
EGAF50000152076 bam 603.8 MB
EGAF50000152077 bam 638.0 MB
EGAF50000152078 bam 573.6 MB
EGAF50000152079 bam 570.3 MB
EGAF50000152080 bam 618.5 MB
EGAF50000152081 bam 620.5 MB
EGAF50000152082 bam 663.0 MB
EGAF50000152083 bam 595.6 MB
EGAF50000152084 bam 614.5 MB
EGAF50000152085 bam 592.3 MB
EGAF50000152086 bam 631.6 MB
EGAF50000152087 bam 573.5 MB
EGAF50000152088 bam 566.2 MB
EGAF50000152089 bam 600.0 MB
EGAF50000152090 bam 595.7 MB
EGAF50000152091 bam 612.2 MB
EGAF50000152092 bam 762.7 MB
EGAF50000152093 bam 601.0 MB
EGAF50000152094 bam 613.6 MB
EGAF50000152095 bam 552.4 MB
EGAF50000152096 bam 573.7 MB
EGAF50000152097 bam 599.0 MB
EGAF50000152098 bam 689.4 MB
EGAF50000152099 bam 648.6 MB
EGAF50000152100 bam 826.0 MB
EGAF50000152101 bam 686.9 MB
EGAF50000152102 bam 848.4 MB
EGAF50000152103 bam 722.5 MB
EGAF50000152104 bam 718.7 MB
EGAF50000152105 bam 714.9 MB
EGAF50000152106 bam 697.5 MB
EGAF50000152107 bam 671.9 MB
EGAF50000152108 bam 667.4 MB
EGAF50000152109 bam 547.2 MB
EGAF50000152110 bam 692.0 MB
EGAF50000152111 bam 671.7 MB
EGAF50000152112 bam 609.0 MB
EGAF50000152113 bam 567.6 MB
EGAF50000152114 bam 615.1 MB
EGAF50000152115 bam 585.3 MB
EGAF50000152116 bam 591.4 MB
EGAF50000152117 bam 545.3 MB
EGAF50000152118 bam 655.8 MB
EGAF50000152119 bam 711.8 MB
EGAF50000152120 bam 558.6 MB
EGAF50000152121 bam 534.1 MB
EGAF50000152122 bam 581.9 MB
EGAF50000152123 bam 655.3 MB
EGAF50000152124 bam 711.5 MB
EGAF50000152125 bam 540.8 MB
EGAF50000152126 bam 626.9 MB
EGAF50000152127 bam 611.4 MB
EGAF50000152128 bam 695.1 MB
EGAF50000152129 bam 655.1 MB
EGAF50000152130 bam 618.3 MB
EGAF50000152131 bam 643.9 MB
EGAF50000152132 bam 624.8 MB
EGAF50000152133 bam 681.5 MB
320 Files (203.3 GB)