About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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HIV exome pilot, exome data part 1 GRCh37_53

exome sequence data for 49 HIV elite long term non-progressors and rapid progressors. Partial dataset (overlap with EGAD00001000087) of raw BAMs mapped to GRCh37_53.

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https://www.sanger.ac.uk/datasharing/ Dataset 1 can only be used for HIV related research

https://www.sanger.ac.uk/datasharing/

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000057 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00000069705 bam 7.1 GB Report
EGAF00000069706 bam 6.9 GB Report
EGAF00000069707 bam 9.3 GB Report
EGAF00000069708 bam 7.1 GB Report
EGAF00000069709 bam 9.7 GB Report
EGAF00000069710 bam 8.8 GB Report
EGAF00000069711 bam 8.9 GB Report
EGAF00000069712 bam 7.0 GB Report
EGAF00000069713 bam 6.9 GB Report
EGAF00000069714 bam 6.6 GB Report
EGAF00000069715 bam 6.9 GB Report
EGAF00000069716 bam 9.9 GB Report
EGAF00000069717 bam 14.4 GB Report
EGAF00000069718 bam 10.1 GB Report
EGAF00000069719 bam 6.7 GB Report
EGAF00000113225 bam 3.1 GB Report
EGAF00000113226 bam 3.0 GB Report
EGAF00000113227 bam 3.1 GB Report
EGAF00000113228 bam 2.9 GB Report
EGAF00000113229 bam 3.3 GB Report
EGAF00000113230 bam 3.2 GB Report
EGAF00000113231 bam 5.0 GB Report
EGAF00000113232 bam 4.8 GB Report
EGAF00000113233 bam 4.9 GB Report
EGAF00000113234 bam 4.6 GB Report
EGAF00000113235 bam 5.2 GB Report
EGAF00000113236 bam 5.2 GB Report
EGAF00000119763 bam 3.6 GB Report
EGAF00000119764 bam 3.4 GB Report
EGAF00000119765 bam 3.5 GB Report
EGAF00000119766 bam 3.6 GB Report
EGAF00000119767 bam 3.3 GB Report
EGAF00000119768 bam 4.5 GB Report
EGAF00000119769 bam 4.1 GB Report
EGAF00000119770 bam 3.7 GB Report
EGAF00000119771 bam 4.3 GB Report
EGAF00000119772 bam 4.0 GB Report
EGAF00000119773 bam 4.1 GB Report
EGAF00000119774 bam 4.2 GB Report
EGAF00000119775 bam 3.8 GB Report
EGAF00000119776 bam 5.2 GB Report
EGAF00000119777 bam 4.8 GB Report
EGAF00000119778 bam 4.1 GB Report
EGAF00000121563 bam 13.6 GB Report
EGAF00000121564 bam 14.3 GB Report
EGAF00000121565 bam 24.0 GB Report
EGAF00000149208 bam 6.0 GB Report
EGAF00000149209 bam 5.8 GB Report
EGAF00000149210 bam 5.8 GB Report
EGAF00000149211 bam 5.8 GB Report
EGAF00000168410 bam 15.0 GB Report
EGAF00000168411 bam 14.8 GB Report
EGAF00000725514 cram 2.4 GB Report
EGAF00000725515 cram 2.6 GB Report
EGAF00000725516 cram 2.4 GB Report
EGAF00000725517 cram 2.3 GB Report
EGAF00000725518 cram 2.0 GB Report
EGAF00000725519 cram 2.2 GB Report
EGAF00000725520 cram 2.4 GB Report
EGAF00000725521 cram 2.6 GB Report
EGAF00000725522 cram 2.5 GB Report
EGAF00000725523 cram 2.3 GB Report
EGAF00000725524 cram 2.0 GB Report
EGAF00000725525 cram 2.2 GB Report
EGAF00000725526 cram 2.9 GB Report
EGAF00000725527 cram 2.9 GB Report
EGAF00000725528 cram 2.8 GB Report
EGAF00000725529 cram 3.1 GB Report
EGAF00000725530 cram 2.8 GB Report
EGAF00000725666 cram 167.7 kB Report
EGAF00000725667 cram 2.9 GB Report
EGAF00000725668 cram 2.9 GB Report
EGAF00000725669 cram 2.8 GB Report
EGAF00000725670 cram 3.1 GB Report
EGAF00000725671 cram 2.8 GB Report
EGAF00000725672 cram 161.2 kB Report
76 Files (401.2 GB)