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Whole genome sequencing of untreated and castration resistant prostate cancers

Low coverage whole genome sequencing of 27 untreated prostate cancers, 9 castration resistant prostate cancers, and 4 benign prostatic hyperplasias.

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Policy statement for the IBT Prostate Cancer Data Access Committee.

European Genome-Phenome Archivec/o European Bioinformatics InstituteWellcome Trust Genome CampusHinxtonCambridgeCB10 1SDUnited KingdomTo whom it may concern,This document refers to the data set, EGAS00001000526, which has been submitted to the European Genome Archive (EGA) for the restricted access by legitimate academic institutions that have agreed to comply with the terms of a Data Access Agreement drafted by the IBT Prostate Cancer Data Access Committee. The Data Access Agreement is available at http://www.uta.fi/pcrc/files/data_access_agreement.pdf.There are a number of steps that a researcher must take to obtain access to this data and the process is overseen by our Data Access Committee, called the IBT Prostate Cancer Data Access Committee (ibt_pcdac@uta.fi). Please be advised that Matti Annala (matti.annala@uta.fi) is authorized to upload data to the EGA for archiving and distribution as part of your submission process.The following individual, Matti Nykter (matti.nykter@uta.fi, postal address: IBT / Computational Biology, FI-33014 University of Tampere, Finland), will take the role of DAC Administrator and will be responsible for creating and maintaining EGA accounts to enable successful applicants to access the data files submitted and will, therefore, require access to the EGA admin tools.Matti Nykter (matti.nykter@uta.fi) has the authority to contact ega-helpdesk@ebi.ac.uk to request changes to be made to the DAC Administrators contact details, in response to a change in circumstances.We can confirm that this submission is consistent with the informed consent of the participants of the study or has been granted ethical approval and is in accordance with the applicable laws and regulations.Sincerely,Matti Nykter (matti.nykter@uta.fi)

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000526 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00000223784 fq.gz 6.2 GB Report
EGAF00000223785 fq.gz 6.5 GB Report
EGAF00000223786 fq.gz 6.3 GB Report
EGAF00000223787 fq.gz 6.6 GB Report
EGAF00000223788 fq.gz 6.2 GB Report
EGAF00000223789 fq.gz 6.5 GB Report
EGAF00000223790 fq.gz 6.4 GB Report
EGAF00000223791 fq.gz 6.6 GB Report
EGAF00000223792 fq.gz 5.8 GB Report
EGAF00000223793 fq.gz 6.1 GB Report
EGAF00000223794 fq.gz 6.3 GB Report
EGAF00000223795 fq.gz 6.5 GB Report
EGAF00000223796 fq.gz 6.2 GB Report
EGAF00000223797 fq.gz 6.5 GB Report
EGAF00000223798 fq.gz 6.0 GB Report
EGAF00000223799 fq.gz 6.2 GB Report
EGAF00000223800 fq.gz 6.2 GB Report
EGAF00000223801 fq.gz 6.6 GB Report
EGAF00000223802 fq.gz 6.1 GB Report
EGAF00000223803 fq.gz 6.4 GB Report
EGAF00000223804 fq.gz 6.0 GB Report
EGAF00000223805 fq.gz 6.4 GB Report
EGAF00000223806 fq.gz 6.0 GB Report
EGAF00000223807 fq.gz 6.1 GB Report
EGAF00000223808 fq.gz 6.0 GB Report
EGAF00000223809 fq.gz 6.1 GB Report
EGAF00000223810 fq.gz 5.8 GB Report
EGAF00000223811 fq.gz 5.9 GB Report
EGAF00000223812 fq.gz 6.0 GB Report
EGAF00000223813 fq.gz 6.1 GB Report
EGAF00000223814 fq.gz 6.1 GB Report
EGAF00000223815 fq.gz 6.4 GB Report
EGAF00000223816 fq.gz 6.2 GB Report
EGAF00000223817 fq.gz 6.5 GB Report
EGAF00000223818 fq.gz 6.7 GB Report
EGAF00000223819 fq.gz 6.9 GB Report
EGAF00000223820 fq.gz 5.9 GB Report
EGAF00000223821 fq.gz 6.2 GB Report
EGAF00000223822 fq.gz 5.9 GB Report
EGAF00000223823 fq.gz 6.3 GB Report
EGAF00000223824 fq.gz 5.7 GB Report
EGAF00000223825 fq.gz 6.0 GB Report
EGAF00000223826 fq.gz 6.3 GB Report
EGAF00000223827 fq.gz 6.4 GB Report
EGAF00000223828 fq.gz 6.1 GB Report
EGAF00000223829 fq.gz 6.3 GB Report
EGAF00000223830 fq.gz 6.5 GB Report
EGAF00000223831 fq.gz 6.7 GB Report
EGAF00000223832 fq.gz 6.0 GB Report
EGAF00000223833 fq.gz 6.1 GB Report
EGAF00000223834 fq.gz 6.0 GB Report
EGAF00000223835 fq.gz 6.4 GB Report
EGAF00000223836 fq.gz 6.2 GB Report
EGAF00000223837 fq.gz 6.5 GB Report
EGAF00000223838 fq.gz 6.1 GB Report
EGAF00000223839 fq.gz 6.4 GB Report
EGAF00000223840 fq.gz 6.0 GB Report
EGAF00000223841 fq.gz 6.4 GB Report
EGAF00000223842 fq.gz 6.3 GB Report
EGAF00000223843 fq.gz 6.6 GB Report
EGAF00000223844 fq.gz 5.8 GB Report
EGAF00000223845 fq.gz 6.0 GB Report
EGAF00000223846 fq.gz 5.9 GB Report
EGAF00000223847 fq.gz 5.9 GB Report
EGAF00000223848 fq.gz 5.9 GB Report
EGAF00000223849 fq.gz 6.1 GB Report
EGAF00000223850 fq.gz 6.2 GB Report
EGAF00000223851 fq.gz 6.3 GB Report
EGAF00000223852 fq.gz 6.0 GB Report
EGAF00000223853 fq.gz 6.1 GB Report
EGAF00000223854 fq.gz 6.1 GB Report
EGAF00000223855 fq.gz 6.1 GB Report
EGAF00000223856 fq.gz 6.1 GB Report
EGAF00000223857 fq.gz 6.1 GB Report
EGAF00000223858 fq.gz 12.5 GB Report
EGAF00000223859 fq.gz 12.7 GB Report
EGAF00000223860 fq.gz 6.0 GB Report
EGAF00000223861 fq.gz 6.1 GB Report
EGAF00000223862 fq.gz 7.2 GB Report
EGAF00000223863 fq.gz 7.3 GB Report
80 Files (511.0 GB)