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Chordoma Sequencing Project RNAseq

This is a continuation of the Chordoma Sequencing Project. All cancers arise due to somatically acquired abnormalities in DNA sequence. Systematic sequencing of cancer genomes allows acquisition of complete catalogues of all classes of somatic mutation present in cancer. These mutation catalogues will allow identification of the somatically mutated cancer genes that are operative and characterise patterns of somatic mutation that may reflect previous exogenous and endogenous mutagenic exposures. In this application, we aim to perform whole genome sequencing on 10 chordoma matched genome pairs. RNA Sequencing/Methylation and SNP6 and an additional sequencing of three cancer cell lines will be added to this work.

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000410 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00000239481 bam 26.4 GB
EGAF00000239482 bam 24.2 GB
EGAF00000239483 bam 26.3 GB
EGAF00000239484 bam 26.0 GB
EGAF00000239485 bam 26.4 GB
EGAF00000239486 bam 23.0 GB
EGAF00000239487 bam 25.9 GB
EGAF00000239488 bam 24.1 GB
EGAF00000566602 cram 14.6 GB
EGAF00000566603 cram 14.2 GB
10 Files (231.1 GB)