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Chordoma Sequencing Project Whole Genome

This is a continuation of the Chordoma Sequencing Project. All cancers arise due to somatically acquired abnormalities in DNA sequence. Systematic sequencing of cancer genomes allows acquisition of complete catalogues of all classes of somatic mutation present in cancer. These mutation catalogues will allow identification of the somatically mutated cancer genes that are operative and characterise patterns of somatic mutation that may reflect previous exogenous and endogenous mutagenic exposures. In this application, we aim to perform whole genome sequencing on 10 chordoma matched genome pairs. RNA Sequencing/Methylation and SNP6 and an additional sequencing of three cancer cell lines will be added to this work.

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000409 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00000231641 bam 15.3 GB
EGAF00000231642 bam 19.6 GB
EGAF00000231643 bam 20.4 GB
EGAF00000231644 bam 18.4 GB
EGAF00000231645 bam 18.2 GB
EGAF00000231646 bam 16.4 GB
EGAF00000231647 bam 14.0 GB
EGAF00000231648 bam 17.3 GB
EGAF00000234591 bam 43.4 GB
EGAF00000242240 bam 20.9 GB
EGAF00000242241 bam 21.9 GB
EGAF00000242242 bam 18.5 GB
EGAF00000242243 bam 24.7 GB
EGAF00000242244 bam 25.1 GB
EGAF00000242245 bam 25.1 GB
EGAF00000242246 bam 30.1 GB
EGAF00000242247 bam 30.5 GB
EGAF00000242248 bam 34.1 GB
EGAF00000242249 bam 35.0 GB
EGAF00000242250 bam 31.0 GB
EGAF00000242251 bam 29.6 GB
EGAF00000242252 bam 29.6 GB
EGAF00000242253 bam 29.5 GB
EGAF00000242254 bam 34.0 GB
EGAF00000242255 bam 39.7 GB
EGAF00000242256 bam 32.8 GB
EGAF00000242257 bam 33.2 GB
EGAF00000242258 bam 33.0 GB
EGAF00000242259 bam 32.7 GB
EGAF00000242260 bam 20.7 GB
EGAF00000242261 bam 21.0 GB
EGAF00000242262 bam 27.7 GB
EGAF00000242263 bam 27.4 GB
EGAF00000242264 bam 27.6 GB
EGAF00000249203 bam 25.2 GB
EGAF00000249204 bam 25.1 GB
EGAF00000249205 bam 29.5 GB
EGAF00000249206 bam 25.8 GB
EGAF00000249691 bam 26.5 GB
EGAF00000250511 bam 34.6 GB
EGAF00000250512 bam 36.6 GB
EGAF00000254671 bam 31.2 GB
EGAF00000254672 bam 31.4 GB
EGAF00000254673 bam 40.1 GB
EGAF00000256492 bam 30.9 GB
EGAF00000256493 bam 31.9 GB
EGAF00000256494 bam 33.3 GB
EGAF00000256495 bam 33.5 GB
EGAF00000283187 cram 16.6 GB
EGAF00000284436 cram 17.9 GB
EGAF00000318466 cram 21.3 GB
EGAF00000318467 cram 16.3 GB
EGAF00000363818 cram 21.6 GB
EGAF00000414674 cram 28.0 GB
EGAF00000558981 cram 19.3 GB
EGAF00000558982 cram 23.0 GB
EGAF00000558983 cram 19.8 GB
EGAF00000558984 cram 12.6 GB
EGAF00000558985 cram 6.1 GB
EGAF00000558986 cram 21.5 GB
EGAF00000563907 cram 18.5 GB
EGAF00000563908 cram 15.6 GB
EGAF00000563909 cram 23.9 GB
EGAF00000602593 cram 16.8 GB
EGAF00000602594 cram 16.5 GB
EGAF00000602595 cram 19.3 GB
EGAF00000606412 cram 21.0 GB
EGAF00000606413 cram 21.1 GB
EGAF00000606414 cram 13.3 GB
EGAF00000606415 cram 22.2 GB
EGAF00000606416 cram 23.0 GB
EGAF00000607251 cram 16.0 GB
EGAF00000607252 cram 16.7 GB
EGAF00000607253 cram 19.4 GB
EGAF00000607255 cram 19.0 GB
EGAF00000607256 cram 18.0 GB
EGAF00000607257 cram 19.1 GB
EGAF00000607258 cram 18.2 GB
EGAF00000607259 cram 12.9 GB
EGAF00000607260 cram 12.5 GB
EGAF00000607261 cram 12.3 GB
EGAF00000607263 cram 20.5 GB
EGAF00000607264 cram 18.7 GB
EGAF00000607265 cram 16.1 GB
84 Files (2.0 TB)