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Determining the quality and complexity of NGS data without a reference genome

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User means a researcher or other employee whose User Institution has previously completed this Data Access Agreement and has received acknowledgement of its acceptance. Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. User Institution means the organisation at which the User is employed, affiliated or enrolled. Terms and Conditions: In signing this Agreement: 1. You agree to use the Data only for the advancement of medical research, according to the consent obtained from sample donors. 2. You agree not to use the data from the Consortium or any part thereof for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 4. You agree not to attempt to link the data provided under this agreement to other information or archive data available for the data sets provided, even if access to that data has been formally granted to you, or it is freely available without restriction, without specific permission being sought from the relevant access committees. 5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or programme management. Should You wish to share the Data with a collaborator outside the same Institution, the third party must make a separate application for access to the Data. 6. You agree to use the data for the approved purpose and project described in your application; use of the data for a new purpose or project will require a new application and approval. 7. You accept that Data will be reissued from time to time, with suitable versioning. If the reissue is at the request of sample donors and/or other ethical scrutiny, You will destroy earlier versions of the Data. 8. You agree to abide by the terms outlined in the Consortium 'Publications Policy' as set out in the Consortium Agreement, Section 9. 9. You agree to acknowledge in any work based in whole or part on the Data, the published paper from which the Data derives, the version of the data, and the role of the Consortium and the relevant primary collectors and their funders. Suitable wording is provided in the Consortium Agreement, Section 9. 10. You accept that the Consortium, the original data creators, depositors or copyright holders, or the funders of the Data or any part of the Data supplied: a) bear no legal responsibility for the accuracy or comprehensiveness of the Data; and b) accept no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason. 11. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 12. You recognise that nothing in this agreement shall operate to transfer to the User Institution any intellectual property rights relating to the Data. The User Institution has the right to develop intellectual property based on comparisons with their own data. 13. You accept that this agreement will terminate immediately upon any breach of this agreement by You and You will be required to destroy any Data held. 14. You accept that it may be necessary for the Consortium or its appointed agent to alter the terms of this agreement from time to time in order to address new concerns. In this event, the Consortium or its appointed agent will contact You to inform You of any changes and You agree that Your continued use of the Data shall be dependent on the parties entering into a new version of the Agreement. 15. You agree that you will submit a report to the Managing Director of the Consortium, if requested, on completion of the agreed purpose. The Managing Director agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Institution. 16. You accept that the Data is protected by and subject to national and international laws, and that You are responsible for ensuring compliance with any such applicable law. The Consortium Managing Director reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that which pertain in the EAA. 17. This agreement shall be construed, interpreted and governed by the laws of the Netherlands and shall be subject to the non-exclusive jurisdiction of the Dutch courts.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000600 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00000277817 fastq.gz 4.9 GB
EGAF00000277818 fastq.gz 5.0 GB
EGAF00000277819 fastq.gz 5.1 GB
EGAF00000277820 fastq.gz 5.2 GB
EGAF00000277821 fastq.gz 4.5 GB
EGAF00000277822 fastq.gz 4.6 GB
EGAF00000277823 fastq.gz 20.4 GB
EGAF00000277824 fastq.gz 20.5 GB
EGAF00000277825 fastq.gz 10.7 GB
EGAF00000277826 fastq.gz 10.9 GB
EGAF00000277827 fastq.gz 5.2 GB
EGAF00000277828 fastq.gz 5.3 GB
EGAF00000277829 fastq.gz 5.1 GB
EGAF00000277830 fastq.gz 5.2 GB
EGAF00000277831 fastq.gz 5.4 GB
EGAF00000277832 fastq.gz 5.4 GB
EGAF00000277833 fastq.gz 8.9 GB
EGAF00000277834 fastq.gz 9.1 GB
EGAF00000277835 fastq.gz 18.2 GB
EGAF00000277836 fastq.gz 18.6 GB
EGAF00000277837 fastq.gz 4.9 GB
EGAF00000277838 fastq.gz 5.0 GB
EGAF00000277839 fastq.gz 5.2 GB
EGAF00000277840 fastq.gz 5.3 GB
EGAF00000277841 fastq.gz 19.3 GB
EGAF00000277842 fastq.gz 19.6 GB
EGAF00000277843 fastq.gz 6.0 GB
EGAF00000277844 fastq.gz 5.8 GB
EGAF00000277845 fastq.gz 12.9 GB
EGAF00000277846 fastq.gz 12.4 GB
EGAF00000277847 fastq.gz 5.8 GB
EGAF00000277848 fastq.gz 5.6 GB
EGAF00000277849 fastq.gz 12.7 GB
EGAF00000277850 fastq.gz 12.0 GB
EGAF00000277851 fastq.gz 5.8 GB
EGAF00000277852 fastq.gz 5.5 GB
EGAF00000277853 fastq.gz 12.3 GB
EGAF00000277854 fastq.gz 11.6 GB
EGAF00000277855 fastq.gz 6.0 GB
EGAF00000277856 fastq.gz 5.9 GB
EGAF00000277857 fastq.gz 12.4 GB
EGAF00000277858 fastq.gz 12.1 GB
EGAF00000277859 fastq.gz 5.9 GB
EGAF00000277860 fastq.gz 5.8 GB
EGAF00000277861 fastq.gz 12.1 GB
EGAF00000277862 fastq.gz 11.8 GB
EGAF00000277863 fastq.gz 6.0 GB
EGAF00000277864 fastq.gz 5.9 GB
EGAF00000277865 fastq.gz 12.3 GB
EGAF00000277866 fastq.gz 11.9 GB
EGAF00000277867 fastq.gz 2.9 GB
EGAF00000277868 fastq.gz 2.7 GB
EGAF00000277869 fastq.gz 11.8 GB
EGAF00000277870 fastq.gz 11.0 GB
EGAF00000277871 fastq.gz 2.9 GB
EGAF00000277872 fastq.gz 2.9 GB
EGAF00000277873 fastq.gz 12.3 GB
EGAF00000277874 fastq.gz 12.4 GB
EGAF00000277875 fastq.gz 2.8 GB
EGAF00000277876 fastq.gz 2.9 GB
EGAF00000277877 fastq.gz 11.8 GB
EGAF00000277878 fastq.gz 11.9 GB
EGAF00000277879 fastq.gz 5.0 GB
EGAF00000277880 fastq.gz 5.1 GB
EGAF00000277881 fastq.gz 12.7 GB
EGAF00000277882 fastq.gz 12.9 GB
EGAF00000277883 fastq.gz 4.9 GB
EGAF00000277884 fastq.gz 5.0 GB
EGAF00000277885 fastq.gz 12.5 GB
EGAF00000277886 fastq.gz 12.6 GB
EGAF00000277887 fastq.gz 5.1 GB
EGAF00000277888 fastq.gz 5.2 GB
EGAF00000277889 fastq.gz 13.0 GB
EGAF00000277890 fastq.gz 13.0 GB
EGAF00000277891 fastq.gz 2.9 GB
EGAF00000277892 fastq.gz 2.9 GB
EGAF00000277893 fastq.gz 10.3 GB
EGAF00000277894 fastq.gz 10.3 GB
EGAF00000277895 fastq.gz 3.2 GB
EGAF00000277896 fastq.gz 3.3 GB
EGAF00000277897 fastq.gz 11.6 GB
EGAF00000277898 fastq.gz 11.7 GB
EGAF00000277899 fastq.gz 3.4 GB
EGAF00000277900 fastq.gz 3.4 GB
EGAF00000277901 fastq.gz 12.3 GB
EGAF00000277902 fastq.gz 12.3 GB
EGAF00000277903 fastq.gz 6.1 GB
EGAF00000277904 fastq.gz 6.1 GB
EGAF00000277905 fastq.gz 10.0 GB
EGAF00000277906 fastq.gz 9.9 GB
EGAF00000277907 fastq.gz 6.1 GB
EGAF00000277908 fastq.gz 6.2 GB
EGAF00000278741 fastq.gz 10.0 GB
EGAF00000278742 fastq.gz 10.0 GB
EGAF00000278743 fastq.gz 5.9 GB
EGAF00000278744 fastq.gz 6.0 GB
EGAF00000278745 fastq.gz 9.7 GB
EGAF00000278746 fastq.gz 9.7 GB
EGAF00000278747 fastq.gz 3.3 GB
EGAF00000278748 fastq.gz 3.6 GB
EGAF00000278749 fastq.gz 3.1 GB
EGAF00000278750 fastq.gz 3.3 GB
EGAF00000278751 fastq.gz 2.7 GB
EGAF00000278752 fastq.gz 2.9 GB
EGAF00000278753 fastq.gz 2.2 GB
EGAF00000278754 fastq.gz 2.3 GB
EGAF00000278755 fastq.gz 2.6 GB
EGAF00000278756 fastq.gz 2.7 GB
EGAF00000278757 fastq.gz 3.1 GB
EGAF00000278758 fastq.gz 3.3 GB
EGAF00000278759 fastq.gz 2.3 GB
EGAF00000278760 fastq.gz 2.4 GB
EGAF00000278761 fastq.gz 3.6 GB
EGAF00000278762 fastq.gz 3.8 GB
EGAF00000278763 fastq.gz 2.6 GB
EGAF00000278764 fastq.gz 2.7 GB
EGAF00000278765 fastq.gz 3.4 GB
EGAF00000278766 fastq.gz 3.5 GB
EGAF00000278767 fastq.gz 3.7 GB
EGAF00000278768 fastq.gz 3.9 GB
EGAF00000278769 fastq.gz 1.5 GB
EGAF00000278770 fastq.gz 1.5 GB
EGAF00000278771 fastq.gz 2.5 GB
EGAF00000278772 fastq.gz 2.5 GB
EGAF00000278773 fastq.gz 1.5 GB
EGAF00000278774 fastq.gz 1.5 GB
EGAF00000278775 fastq.gz 2.8 GB
EGAF00000278776 fastq.gz 2.7 GB
EGAF00000278777 fastq.gz 1.6 GB
EGAF00000278778 fastq.gz 1.6 GB
EGAF00000278779 fastq.gz 1.4 GB
EGAF00000278780 fastq.gz 1.4 GB
EGAF00000278781 fastq.gz 2.3 GB
EGAF00000278782 fastq.gz 2.3 GB
EGAF00000278783 fastq.gz 890.6 MB
EGAF00000278784 fastq.gz 889.2 MB
EGAF00000278785 fastq.gz 1.5 GB
EGAF00000278786 fastq.gz 1.5 GB
EGAF00000278787 fastq.gz 6.9 GB
EGAF00000278788 fastq.gz 6.6 GB
EGAF00000278789 fastq.gz 1.7 GB
EGAF00000278790 fastq.gz 1.6 GB
EGAF00000278791 fastq.gz 1.2 GB
EGAF00000278792 fastq.gz 1.1 GB
EGAF00000278793 fastq.gz 3.0 GB
EGAF00000278794 fastq.gz 3.0 GB
EGAF00000278795 fastq.gz 1.5 GB
EGAF00000278796 fastq.gz 1.5 GB
EGAF00000278797 fastq.gz 1.6 GB
EGAF00000278798 fastq.gz 1.6 GB
EGAF00000278799 fastq.gz 1.9 GB
EGAF00000278800 fastq.gz 1.9 GB
EGAF00000278801 fastq.gz 2.7 GB
EGAF00000278802 fastq.gz 2.7 GB
EGAF00000278803 fastq.gz 1.6 GB
EGAF00000278804 fastq.gz 1.6 GB
EGAF00000278805 fastq.gz 4.6 GB
EGAF00000278806 fastq.gz 4.5 GB
EGAF00000278807 fastq.gz 5.7 GB
EGAF00000278808 fastq.gz 5.5 GB
EGAF00000278809 fastq.gz 1.1 GB
EGAF00000278810 fastq.gz 1.1 GB
EGAF00000278811 fastq.gz 1.6 GB
EGAF00000278812 fastq.gz 1.6 GB
EGAF00000278813 fastq.gz 1.9 GB
EGAF00000278814 fastq.gz 1.9 GB
EGAF00000278815 fastq.gz 2.6 GB
EGAF00000278816 fastq.gz 2.6 GB
EGAF00000278817 fastq.gz 1.4 GB
EGAF00000278818 fastq.gz 1.4 GB
EGAF00000278819 fastq.gz 2.2 GB
EGAF00000278820 fastq.gz 2.2 GB
EGAF00000278821 bam 10.2 GB
EGAF00000278822 bam 10.6 GB
EGAF00000278823 bam 9.5 GB
EGAF00000278824 bam 36.6 GB
EGAF00000278825 bam 20.2 GB
EGAF00000278826 bam 10.9 GB
EGAF00000278827 bam 10.8 GB
EGAF00000278828 bam 11.2 GB
EGAF00000278829 bam 17.0 GB
EGAF00000278830 bam 33.0 GB
EGAF00000278831 bam 10.3 GB
EGAF00000278832 bam 10.8 GB
EGAF00000278833 bam 34.8 GB
EGAF00000278834 bam 11.8 GB
EGAF00000278835 bam 23.6 GB
EGAF00000278836 bam 11.4 GB
EGAF00000278837 bam 23.2 GB
EGAF00000278838 bam 11.4 GB
EGAF00000278839 bam 22.5 GB
EGAF00000278840 bam 11.7 GB
EGAF00000278841 bam 22.8 GB
EGAF00000278842 bam 11.5 GB
EGAF00000278843 bam 22.4 GB
EGAF00000278844 bam 11.7 GB
EGAF00000278845 bam 22.6 GB
EGAF00000278846 bam 5.9 GB
EGAF00000278847 bam 21.3 GB
EGAF00000278848 bam 6.2 GB
EGAF00000278849 bam 23.2 GB
EGAF00000278850 bam 6.0 GB
EGAF00000278851 bam 22.1 GB
EGAF00000278852 bam 10.1 GB
EGAF00000278853 bam 23.7 GB
EGAF00000278854 bam 10.0 GB
EGAF00000278855 bam 23.2 GB
EGAF00000278856 bam 10.2 GB
EGAF00000278857 bam 24.0 GB
EGAF00000278858 bam 6.1 GB
EGAF00000278859 bam 19.6 GB
EGAF00000278860 bam 6.9 GB
EGAF00000278861 bam 21.8 GB
EGAF00000278862 bam 7.2 GB
EGAF00000278863 bam 23.0 GB
EGAF00000278864 bam 12.2 GB
EGAF00000278865 bam 18.9 GB
EGAF00000278866 bam 12.3 GB
EGAF00000278867 bam 19.0 GB
EGAF00000278868 bam 12.0 GB
EGAF00000278869 bam 18.5 GB
EGAF00000278870 bam 7.3 GB
EGAF00000278871 bam 6.9 GB
EGAF00000278872 bam 5.3 GB
EGAF00000278873 bam 4.5 GB
EGAF00000278874 bam 5.1 GB
EGAF00000278875 bam 6.3 GB
EGAF00000278876 bam 5.0 GB
EGAF00000278877 bam 7.6 GB
EGAF00000278878 bam 5.3 GB
EGAF00000278879 bam 6.4 GB
EGAF00000278880 bam 7.7 GB
EGAF00000278881 bam 2.6 GB
EGAF00000278882 bam 4.3 GB
EGAF00000278883 bam 2.8 GB
EGAF00000278884 bam 4.9 GB
EGAF00000278885 bam 2.9 GB
EGAF00000278886 bam 2.5 GB
EGAF00000278887 bam 4.2 GB
EGAF00000278888 bam 1.6 GB
EGAF00000278889 bam 2.6 GB
EGAF00000278890 bam 13.8 GB
EGAF00000278891 bam 3.3 GB
EGAF00000278892 bam 2.4 GB
EGAF00000278893 bam 5.5 GB
EGAF00000278894 bam 2.6 GB
EGAF00000278895 bam 2.9 GB
EGAF00000278896 bam 3.5 GB
EGAF00000278897 bam 4.8 GB
EGAF00000278898 bam 2.8 GB
EGAF00000278899 bam 8.6 GB
EGAF00000278900 bam 10.5 GB
EGAF00000278901 bam 2.0 GB
EGAF00000278902 bam 2.9 GB
EGAF00000278903 bam 3.4 GB
EGAF00000278904 bam 5.1 GB
EGAF00000278905 bam 2.6 GB
EGAF00000278906 bam 3.9 GB
258 Files (2.0 TB)