About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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SCCOHT

Exome sequencing of familial and sporadic small cell cancer of ovary cases.

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McGill-DKFZ Pediatric Brain Tumour Consortium; McGill University- University of Heidelberg Access to Genomic Data

McGill-DKFZ Pediatric Brain Tumour Consortium (EGAC00001000048) This document specifies the policy for granting access to the European Genome-phenome Archive (EGA) secure Web based tools for managing data access pem1issions to the data stored in the EGA database. Access is granted to those Data Access Committee members named in this document by Paul Flicek, head of Genes, Genomes and Variation. Conditions of access: The account holder will abide by all current and future policies of the EBI for computer use as well as computer use policies of the European Molecular Biology Laboratory (E1v1BL), of which the EBI is a part. A ll EGA specific policies and standard operating procedures (SOPs) must also be followed. Al l applicable policies will be provided to the authorized users. Method of access: The EBI will create a personal account for the authorized person. The account usemame and password together with a RSA key pro vide access to the secure EGA infrastructure. A separate document with detailed guidelines on how to access and use these too ls is provided to each account hold er. The EGA help-desk provides training when needed. Review: All individuals will access to the EGA user authorization too ls will be reviewed annually by Paul Flicek. Any staff changes affecting the authorized person must be provided immediately to Paul Flicek (t1icek(a2ebi .ac.uk). Authorized Data Access Committee user: EefHam1sen, PhD McGill University/McGill University Health Center, 4060 Ste Catherine West, PT-239 Montreal, Qc H3Z2Z3, CANADA eef.harmsen@mcgill.ca

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000720 Other
EGAS00001000721 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00000068857 txt.gz 1.2 GB Report
EGAF00000068858 txt.gz 1.3 GB
EGAF00000068891 txt.gz 3.4 GB Report
EGAF00000068892 txt.gz 3.5 GB Report
EGAF00000068897 txt.gz 1.4 GB Report
EGAF00000068898 txt.gz 1.3 GB Report
EGAF00000068901 txt.gz 1.4 GB Report
EGAF00000068902 txt.gz 1.4 GB Report
EGAF00000068903 txt.gz 1.4 GB
EGAF00000068904 txt.gz 1.4 GB Report
EGAF00000069015 txt.gz 3.3 GB Report
EGAF00000069016 txt.gz 3.4 GB Report
EGAF00000069031 txt.gz 3.0 GB Report
EGAF00000069032 txt.gz 3.1 GB Report
EGAF00000069077 txt.gz 2.3 GB
EGAF00000069078 txt.gz 2.4 GB
EGAF00000069127 txt.gz 1.7 GB Report
EGAF00000069128 txt.gz 1.8 GB Report
EGAF00000069181 txt.gz 1.7 GB
EGAF00000069182 txt.gz 1.7 GB Report
EGAF00000069185 txt.gz 1.7 GB
EGAF00000069186 txt.gz 1.7 GB Report
EGAF00000069213 txt.gz 3.6 GB Report
EGAF00000069214 txt.gz 3.7 GB Report
EGAF00000507629 txt.gz 3.1 GB
EGAF00000507630 txt.gz 3.2 GB
EGAF00000507631 fastq.gz 4.0 GB Report
EGAF00000507632 fastq.gz 4.0 GB Report
EGAF00000507633 txt.gz 1.5 GB
EGAF00000507634 txt.gz 1.5 GB
EGAF00000507635 txt.gz 1.5 GB
EGAF00000507636 txt.gz 1.5 GB
EGAF00000507910 fastq.gz 1.8 GB Report
EGAF00000507911 fastq.gz 1.8 GB Report
EGAF00000507914 fastq.gz 1.8 GB Report
EGAF00000507915 fastq.gz 1.8 GB Report
EGAF00000507936 fastq.gz 2.1 GB
EGAF00000507937 fastq.gz 2.1 GB Report
EGAF00000511779 fastq.gz 4.5 GB Report
EGAF00000511780 fastq.gz 4.2 GB Report
EGAF00000511823 fastq.gz 7.4 GB Report
EGAF00000511824 fastq.gz 7.5 GB Report
EGAF00000511825 fastq.gz 4.8 GB Report
EGAF00000511826 fastq.gz 4.9 GB Report
EGAF00000511827 fastq.gz 5.5 GB Report
EGAF00000511828 fastq.gz 5.5 GB Report
EGAF00000511829 fastq.gz 1.9 GB Report
EGAF00000511830 fastq.gz 1.9 GB Report
EGAF00000511831 fastq.gz 1.9 GB Report
EGAF00000511832 fastq.gz 1.9 GB Report
EGAF00000511833 fastq.gz 2.5 GB Report
EGAF00000511834 fastq.gz 2.6 GB Report
EGAF00000511835 fastq.gz 2.5 GB Report
EGAF00000511836 fastq.gz 2.6 GB Report
EGAF00000511837 fastq.gz 2.6 GB Report
EGAF00000511838 fastq.gz 2.6 GB Report
EGAF00000511839 fastq.gz 2.6 GB Report
EGAF00000511840 fastq.gz 2.6 GB Report
EGAF00000511841 fastq.gz 3.5 GB Report
EGAF00000511842 fastq.gz 3.6 GB Report
EGAF00000511843 fastq.gz 3.5 GB Report
EGAF00000511844 fastq.gz 3.6 GB Report
EGAF00000511845 fastq.gz 823.9 MB Report
EGAF00000511846 fastq.gz 834.5 MB Report
EGAF00000511847 fastq.gz 807.8 MB Report
EGAF00000511848 fastq.gz 816.0 MB Report
EGAF00000511849 fastq.gz 4.1 GB Report
EGAF00000511850 fastq.gz 4.2 GB Report
EGAF00000511851 fastq.gz 4.0 GB Report
EGAF00000511852 fastq.gz 4.1 GB Report
EGAF00000511853 fastq.gz 4.1 GB Report
EGAF00000511854 fastq.gz 4.1 GB Report
EGAF00000511855 fastq.gz 4.0 GB Report
EGAF00000511856 fastq.gz 4.0 GB Report
EGAF00000511857 fastq.gz 905.4 MB Report
EGAF00000511858 fastq.gz 933.9 MB Report
EGAF00000511859 fastq.gz 900.2 MB Report
EGAF00000511860 fastq.gz 932.1 MB Report
EGAF00000511861 fastq.gz 827.6 MB Report
EGAF00000511862 fastq.gz 854.4 MB Report
EGAF00000511863 fastq.gz 57.6 MB Report
EGAF00000511864 fastq.gz 58.8 MB Report
EGAF00000511865 fastq.gz 1.2 GB Report
EGAF00000511866 fastq.gz 1.2 GB Report
EGAF00000511867 fastq.gz 514.7 MB Report
EGAF00000511868 fastq.gz 528.9 MB Report
EGAF00000511869 fastq.gz 1.2 GB Report
EGAF00000511870 fastq.gz 1.2 GB Report
EGAF00000511871 fastq.gz 1.1 GB Report
EGAF00000511872 fastq.gz 1.1 GB Report
EGAF00000511873 fastq.gz 61.4 MB Report
EGAF00000511874 fastq.gz 62.5 MB Report
EGAF00000511875 fastq.gz 58.4 MB Report
EGAF00000511876 fastq.gz 59.9 MB Report
EGAF00000511877 fastq.gz 536.9 MB Report
EGAF00000511878 fastq.gz 550.7 MB Report
EGAF00000511879 fastq.gz 513.1 MB Report
EGAF00000511880 fastq.gz 529.2 MB Report
EGAF00000511881 fastq.gz 481.4 MB Report
EGAF00000511882 fastq.gz 495.0 MB Report
EGAF00000511883 fastq.gz 936.7 MB Report
EGAF00000511884 fastq.gz 958.9 MB Report
EGAF00000511885 fastq.gz 933.3 MB Report
EGAF00000511886 fastq.gz 957.5 MB Report
EGAF00000511887 fastq.gz 917.3 MB Report
EGAF00000511888 fastq.gz 950.1 MB Report
EGAF00000511889 fastq.gz 912.1 MB Report
EGAF00000511890 fastq.gz 943.4 MB Report
EGAF00000511891 fastq.gz 983.2 MB Report
EGAF00000511892 fastq.gz 1.0 GB Report
EGAF00000511893 fastq.gz 1.3 GB Report
EGAF00000511894 fastq.gz 1.4 GB Report
112 Files (236.3 GB)