Use of Deep Sequencing to Dectect Clonal Mutations In Sun Exposed Skin Epidermis PART2

This study aims to define the landscape of somatic mutations in sun exposed human skin by deep sequencing, analyse their frequency and use the data to infer the effect of mutations on proliferating cell behaviour. The frequency of each mutation will reflect the size of the clone of cells in the tissue sample. By analyzing small samples, clones with as few as 100 cells will be detectable. Allele frequency distributions for each mutation will be used to infer cell fate using published methods (Klein et al. 2010). This study will shed unprecedented light on the early clonal events that lead to the emergence of cancer.

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Studies are experimental investigations of a particular phenomenon. e.g. case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients. Click on one of the Study IDs below to find out more.

Study ID Study Title Study Type
EGAS00001000603 Cancer Genomics
ID File Type Size Located in Quality Control
EGAF00000508790 cram 1.1 GB
EGAF00000508791 cram 1.6 GB
EGAF00000508792 cram 230.3 MB
EGAF00000508793 cram 20.8 MB
EGAF00000508794 cram 126.2 MB
EGAF00000508795 cram 46.5 MB
EGAF00000508796 cram 1.9 GB
EGAF00000508797 cram 1.7 GB
EGAF00000508798 cram 1.8 GB
EGAF00000508799 cram 993.6 MB
EGAF00000508800 cram 1.6 GB
EGAF00000508801 cram 3.8 MB
EGAF00000508802 cram 113.2 MB
EGAF00000508803 cram 156.3 MB
EGAF00000508804 cram 583.5 MB
EGAF00000508805 cram 180.6 MB
EGAF00000508806 cram 647.9 MB
EGAF00000508807 cram 647.0 MB
EGAF00000508808 cram 787.0 MB
EGAF00000508809 cram 764.6 MB
EGAF00000508810 cram 793.2 MB
EGAF00000508811 cram 883.7 MB
EGAF00000508812 cram 1.0 GB
EGAF00000508813 cram 893.7 MB
EGAF00000508814 cram 878.3 MB
EGAF00000508815 cram 814.6 MB
EGAF00000508816 cram 834.1 MB
EGAF00000508817 cram 911.0 MB
EGAF00000508818 cram 910.8 MB
EGAF00000508819 cram 907.0 MB
EGAF00000508820 cram 916.1 MB
EGAF00000508821 cram 885.2 MB
EGAF00000508822 cram 1.5 GB
EGAF00000508823 cram 1.7 GB
EGAF00000508824 cram 195.1 MB
EGAF00000508825 cram 137.7 MB
EGAF00000508826 cram 135.7 MB
EGAF00000508827 cram 271.0 MB
EGAF00000508828 cram 1.7 GB
EGAF00000508829 cram 127.4 MB
EGAF00000508830 cram 1.6 GB
EGAF00000508831 cram 1.8 GB
EGAF00000508832 cram 571.6 MB
EGAF00000508833 cram 239.3 MB
EGAF00000508834 cram 136.3 MB
EGAF00000508835 cram 282.3 MB
EGAF00000508836 cram 397.9 MB
EGAF00000508837 cram 284.2 MB
EGAF00000512524 cram 4.5 GB
EGAF00000512525 cram 4.5 GB
EGAF00000512526 cram 107.7 MB
EGAF00000512527 cram 43.1 MB
EGAF00000512528 cram 106.8 MB
EGAF00000512529 cram 44.6 MB
EGAF00000512530 cram 101.5 MB
EGAF00000512531 cram 117.8 kB
EGAF00000512532 cram 3.6 GB
EGAF00000512533 cram 3.3 GB
EGAF00000512534 cram 89.1 MB
EGAF00000512535 cram 32.3 MB
EGAF00000512536 cram 74.0 MB
EGAF00000512537 cram 15.9 MB
EGAF00000512538 cram 37.5 MB
EGAF00000512539 cram 78.1 MB
EGAF00000512540 cram 2.9 GB
EGAF00000512541 cram 2.8 GB
EGAF00000512542 cram 35.9 MB
EGAF00000512543 cram 46.6 MB
EGAF00000512544 cram 101.7 MB
EGAF00000512545 cram 99.1 MB
EGAF00000512546 cram 91.5 MB
EGAF00000512547 cram 33.8 MB
EGAF00000512548 cram 1.8 GB
EGAF00000512549 cram 3.1 GB
EGAF00000512550 cram 113.9 MB
EGAF00000512551 cram 93.5 MB
EGAF00000512552 cram 119.4 MB
EGAF00000512553 cram 8.3 MB
EGAF00000512554 cram 30.8 MB
EGAF00000512555 cram 21.1 MB
EGAF00000512556 cram 2.7 GB
EGAF00000512557 cram 2.6 GB
EGAF00000512558 cram 1.5 GB
EGAF00000512559 cram 61.6 MB
EGAF00000512560 cram 62.8 MB
EGAF00000512561 cram 12.1 MB
EGAF00000512562 cram 222.2 MB
EGAF00000512563 cram 17.6 MB
EGAF00000512564 cram 2.7 GB
EGAF00000512565 cram 2.8 GB
EGAF00000512566 cram 77.8 MB
EGAF00000512567 cram 71.2 MB
EGAF00000512568 cram 113.7 MB
EGAF00000512569 cram 14.3 MB
EGAF00000512570 cram 1.4 GB
EGAF00000512571 cram 36.9 MB
EGAF00000512572 cram 3.1 GB
EGAF00000512573 cram 3.2 GB
EGAF00000512574 cram 30.3 MB
EGAF00000512575 cram 30.5 MB
EGAF00000512576 cram 135.9 MB
EGAF00000512577 cram 33.2 MB
EGAF00000512578 cram 2.7 GB
EGAF00000512579 cram 221.5 MB
EGAF00000512580 cram 1.7 GB
EGAF00000512581 cram 3.4 GB
EGAF00000512582 cram 141.0 MB
EGAF00000512583 cram 94.6 MB
EGAF00000512584 cram 71.9 MB
EGAF00000512585 cram 110.9 MB
EGAF00000512586 cram 41.0 MB
EGAF00000512587 cram 11.9 MB
EGAF00000512588 cram 2.7 GB
EGAF00000512589 cram 2.8 GB
EGAF00000512590 cram 147.7 MB
EGAF00000512591 cram 66.8 MB
EGAF00000512592 cram 247.3 MB
EGAF00000512593 cram 7.6 MB
EGAF00000512594 cram 3.5 GB
EGAF00000512595 cram 34.3 MB
EGAF00000512596 cram 3.0 GB
EGAF00000512597 cram 3.1 GB
EGAF00000512598 cram 195.9 MB
EGAF00000512599 cram 39.1 MB
EGAF00000512600 cram 82.0 MB
EGAF00000512601 cram 50.9 MB
EGAF00000512602 cram 3.1 GB
EGAF00000512603 cram 21.8 MB
EGAF00000512604 cram 3.6 GB
EGAF00000512605 cram 4.1 GB
EGAF00000512606 cram 84.7 MB
EGAF00000512607 cram 88.9 MB
EGAF00000512608 cram 90.7 MB
EGAF00000512609 cram 158.7 MB
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EGAF00000512611 cram 41.9 MB
EGAF00000512612 cram 3.6 GB
EGAF00000512613 cram 2.8 GB
EGAF00000512614 cram 94.2 MB
EGAF00000512615 cram 90.0 MB
EGAF00000512616 cram 102.7 MB
EGAF00000512617 cram 20.5 MB
EGAF00000512618 cram 130.1 MB
EGAF00000512619 cram 121.9 MB
EGAF00000512620 cram 2.8 GB
EGAF00000512621 cram 2.5 GB
EGAF00000512622 cram 18.4 MB
EGAF00000512623 cram 52.0 MB
EGAF00000512624 cram 37.4 MB
EGAF00000512625 cram 227.7 MB
EGAF00000512626 cram 2.6 GB
EGAF00000512627 cram 78.9 MB
EGAF00000512628 cram 2.8 GB
EGAF00000512629 cram 2.5 GB
EGAF00000512630 cram 18.6 MB
EGAF00000512631 cram 44.2 MB
EGAF00000512632 cram 37.6 MB
EGAF00000512633 cram 157.9 MB
EGAF00000512634 cram 40.0 MB
EGAF00000512635 cram 41.0 MB
EGAF00000512636 cram 3.9 GB
EGAF00000512637 cram 5.0 GB
EGAF00000512638 cram 43.3 MB
EGAF00000512639 cram 75.1 MB
EGAF00000512640 cram 84.2 MB
EGAF00000512641 cram 174.6 MB
EGAF00000512642 cram 756.9 MB
EGAF00000512643 cram 45.6 MB
EGAF00000512644 cram 1.2 GB
EGAF00000512645 cram 4.6 GB
EGAF00000512646 cram 36.2 MB
EGAF00000512647 cram 121.5 MB
EGAF00000512648 cram 156.2 MB
EGAF00000512649 cram 57.1 MB
EGAF00000512650 cram 21.0 MB
EGAF00000512651 cram 24.7 MB
EGAF00000512652 cram 4.0 GB
EGAF00000512653 cram 3.5 GB
EGAF00000512654 cram 50.2 MB
EGAF00000512655 cram 31.5 MB
EGAF00000512656 cram 47.3 MB
EGAF00000512657 cram 42.3 MB
EGAF00000512658 cram 404.5 MB
EGAF00000512659 cram 25.6 MB
EGAF00000512660 cram 3.0 GB
EGAF00000512661 cram 3.2 GB
EGAF00000512662 cram 121.8 MB
EGAF00000512663 cram 25.2 MB
EGAF00000512664 cram 35.8 MB
EGAF00000512665 cram 31.4 MB
EGAF00000512666 cram 3.6 GB
EGAF00000512667 cram 78.0 MB
EGAF00000512668 cram 2.5 GB
EGAF00000512669 cram 4.0 GB
EGAF00000512670 cram 40.9 MB
EGAF00000512671 cram 53.5 MB
EGAF00000512672 cram 45.0 MB
EGAF00000512673 cram 75.2 MB
EGAF00000512674 cram 3.0 GB
EGAF00000512675 cram 73.9 MB
EGAF00000512676 cram 5.4 GB
EGAF00000512677 cram 2.8 GB
EGAF00000512678 cram 108.3 MB
EGAF00000512679 cram 27.1 MB
EGAF00000512680 cram 115.4 MB
EGAF00000512681 cram 26.8 MB
EGAF00000512682 cram 75.3 MB
EGAF00000512683 cram 28.6 MB
EGAF00000512684 cram 271.9 kB
EGAF00000512685 cram 110.6 kB
EGAF00000512686 cram 940.0 MB
EGAF00000512687 cram 337.9 MB
EGAF00000512688 cram 430.4 MB
EGAF00000512689 cram 645.1 MB
EGAF00000512690 cram 3.6 GB
EGAF00000512691 cram 263.3 MB
EGAF00000512692 cram 3.5 GB
EGAF00000512693 cram 3.4 GB
EGAF00000512694 cram 564.8 MB
EGAF00000512695 cram 215.6 MB
EGAF00000512696 cram 391.7 MB
EGAF00000512697 cram 766.1 MB
EGAF00000512698 cram 316.8 MB
EGAF00000512699 cram 455.5 MB
EGAF00000512700 cram 790.5 kB
EGAF00000512701 cram 1.7 GB
EGAF00000512702 cram 217.6 MB
EGAF00000512703 cram 73.5 MB
EGAF00000512704 cram 247.1 MB
EGAF00000512705 cram 2.1 GB
EGAF00000512706 cram 2.4 GB
EGAF00000512707 cram 18.7 MB
EGAF00000512708 cram 2.1 GB
EGAF00000512709 cram 2.0 GB
EGAF00000512710 cram 177.2 MB
EGAF00000512711 cram 366.9 MB
EGAF00000512712 cram 2.2 GB
EGAF00000512713 cram 162.7 MB
EGAF00000512714 cram 552.7 MB
EGAF00000512715 cram 147.1 MB
EGAF00000512716 cram 1.8 GB
EGAF00000512717 cram 1.4 GB
EGAF00000512718 cram 632.4 MB
EGAF00000512719 cram 1.0 GB
EGAF00000512720 cram 115.8 MB
EGAF00000512721 cram 281.6 MB
EGAF00000512722 cram 2.4 GB
EGAF00000512723 cram 103.6 MB
EGAF00000512724 cram 1.9 GB
EGAF00000512725 cram 1.8 GB
EGAF00000512726 cram 169.2 MB
EGAF00000512727 cram 291.9 MB
EGAF00000512728 cram 79.0 MB
EGAF00000512729 cram 150.8 MB
EGAF00000512730 cram 2.3 GB
EGAF00000512731 cram 115.0 MB
EGAF00000512732 cram 2.4 GB
EGAF00000512733 cram 2.4 GB
EGAF00000512734 cram 106.2 MB
EGAF00000512735 cram 159.0 MB
EGAF00000512736 cram 199.8 MB
EGAF00000512737 cram 361.0 MB
EGAF00000512738 cram 3.2 GB
EGAF00000512739 cram 148.3 MB
EGAF00000512740 cram 2.6 GB
EGAF00000512741 cram 2.3 GB
EGAF00000512742 cram 275.1 MB
EGAF00000512743 cram 782.3 MB
EGAF00000512744 cram 325.4 MB
EGAF00000512745 cram 357.5 MB
EGAF00000512746 cram 691.6 MB
EGAF00000512747 cram 283.2 MB
EGAF00000512748 cram 2.2 GB
EGAF00000512749 cram 2.8 GB
EGAF00000512750 cram 251.2 MB
EGAF00000512751 cram 989.4 MB
EGAF00000512752 cram 301.3 MB
EGAF00000512753 cram 190.7 MB
EGAF00000512754 cram 2.9 GB
EGAF00000512755 cram 94.1 MB
EGAF00000512756 cram 2.3 GB
EGAF00000512757 cram 2.5 GB
EGAF00000512758 cram 222.7 MB
EGAF00000512759 cram 31.0 MB
EGAF00000512760 cram 240.7 MB
EGAF00000512761 cram 132.9 MB
EGAF00000512762 cram 2.3 GB
EGAF00000512763 cram 292.8 MB
EGAF00000519085 cram 4.3 GB
EGAF00000519086 cram 3.9 GB
EGAF00000519087 cram 36.9 MB
EGAF00000519088 cram 72.4 MB
EGAF00000519089 cram 124.1 MB
EGAF00000519090 cram 59.1 MB
EGAF00000519091 cram 230.5 MB
EGAF00000519092 cram 32.8 MB
EGAF00000519093 cram 3.9 GB
EGAF00000519094 cram 2.3 GB
EGAF00000519095 cram 84.1 MB
EGAF00000519096 cram 275.2 MB
EGAF00000519097 cram 63.6 MB
EGAF00000519098 cram 38.1 MB
EGAF00000519099 cram 997.2 MB
EGAF00000519100 cram 45.6 MB
EGAF00000520814 cram 4.1 GB
EGAF00000520815 cram 2.1 GB
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EGAF00000836244 cram 607.3 MB
EGAF00000836245 cram 580.6 MB
EGAF00000836246 cram 600.8 MB
EGAF00000836247 cram 659.9 MB
EGAF00000836248 cram 548.6 MB
EGAF00000836249 cram 637.7 MB
EGAF00000836250 cram 586.4 MB
EGAF00000836251 cram 575.0 MB
EGAF00000836252 cram 630.7 MB
EGAF00000836253 cram 601.4 MB
EGAF00000836254 cram 699.5 MB
EGAF00000836255 cram 539.5 MB
EGAF00000836256 cram 590.7 MB
EGAF00000836257 cram 646.9 MB
EGAF00000836258 cram 614.2 MB
EGAF00000836259 cram 510.6 MB
EGAF00000836260 cram 329.6 MB
EGAF00000836261 cram 360.1 MB
EGAF00000836262 cram 393.8 MB
EGAF00000836263 cram 414.2 MB
EGAF00000836264 cram 417.7 MB
EGAF00000836265 cram 459.0 MB
EGAF00000836266 cram 418.1 MB
EGAF00000836267 cram 418.6 MB
EGAF00000836268 cram 365.0 MB
EGAF00000836269 cram 377.3 MB
EGAF00000836270 cram 386.4 MB
EGAF00000836271 cram 449.6 MB
EGAF00000836272 cram 462.2 MB
EGAF00000836273 cram 483.2 MB
EGAF00000836274 cram 408.6 MB
EGAF00000836275 cram 415.9 MB
EGAF00000836276 cram 420.5 MB
EGAF00000836277 cram 442.0 MB
EGAF00000836278 cram 420.9 MB
EGAF00000836279 cram 464.3 MB
EGAF00000836280 cram 471.9 MB
EGAF00000836281 cram 409.6 MB
EGAF00000836282 cram 407.4 MB
EGAF00000836283 cram 371.7 MB
EGAF00000836284 cram 1.3 GB
EGAF00000836285 cram 1.7 GB
EGAF00000836286 cram 329.9 MB
EGAF00000836287 cram 359.7 MB
EGAF00000836288 cram 394.0 MB
EGAF00000836289 cram 413.8 MB
EGAF00000836290 cram 417.7 MB
EGAF00000836291 cram 458.1 MB
EGAF00000836292 cram 418.3 MB
EGAF00000836293 cram 418.1 MB
EGAF00000836294 cram 365.1 MB
EGAF00000836295 cram 377.0 MB
EGAF00000836296 cram 386.1 MB
EGAF00000836297 cram 450.0 MB
EGAF00000836298 cram 461.6 MB
EGAF00000836299 cram 483.3 MB
EGAF00000836300 cram 408.0 MB
EGAF00000836301 cram 416.3 MB
EGAF00000836302 cram 420.6 MB
EGAF00000836303 cram 441.7 MB
EGAF00000836304 cram 420.6 MB
EGAF00000836305 cram 464.4 MB
EGAF00000836306 cram 471.6 MB
EGAF00000836307 cram 409.3 MB
EGAF00000836308 cram 407.2 MB
EGAF00000836309 cram 371.8 MB
EGAF00000836310 cram 1.3 GB
EGAF00000836311 cram 1.7 GB
EGAF00000851812 cram 380.6 MB
EGAF00000851813 cram 385.0 MB
EGAF00000851814 cram 442.9 MB
EGAF00000851815 cram 426.8 MB
EGAF00000851816 cram 397.7 MB
EGAF00000851817 cram 408.1 MB
EGAF00000851818 cram 418.4 MB
EGAF00000851819 cram 537.4 MB
EGAF00000851820 cram 455.8 MB
EGAF00000851821 cram 432.5 MB
EGAF00000851822 cram 409.7 MB
EGAF00000851823 cram 417.6 MB
EGAF00000851824 cram 443.3 MB
EGAF00000851825 cram 419.7 MB
EGAF00000851826 cram 453.2 MB
EGAF00000851827 cram 432.9 MB
EGAF00000851828 cram 427.5 MB
EGAF00000851829 cram 408.8 MB
EGAF00000851830 cram 450.3 MB
EGAF00000851831 cram 355.2 MB
EGAF00000851832 cram 438.2 MB
EGAF00000851833 cram 429.6 MB
EGAF00000851834 cram 476.1 MB
EGAF00000851835 cram 404.6 MB
EGAF00000851836 cram 372.3 MB
EGAF00000851837 cram 376.1 MB
EGAF00000851838 cram 433.0 MB
EGAF00000851839 cram 417.3 MB
EGAF00000851840 cram 388.0 MB
EGAF00000851841 cram 398.9 MB
EGAF00000851842 cram 409.8 MB
EGAF00000851843 cram 525.1 MB
EGAF00000851844 cram 445.4 MB
EGAF00000851845 cram 422.7 MB
EGAF00000851846 cram 399.9 MB
EGAF00000851847 cram 408.2 MB
EGAF00000851848 cram 433.1 MB
EGAF00000851849 cram 410.3 MB
EGAF00000851850 cram 443.3 MB
EGAF00000851851 cram 422.4 MB
EGAF00000851852 cram 417.9 MB
EGAF00000851853 cram 399.6 MB
EGAF00000851854 cram 440.6 MB
EGAF00000851855 cram 348.0 MB
EGAF00000851856 cram 429.0 MB
EGAF00000851857 cram 421.2 MB
EGAF00000851858 cram 465.6 MB
EGAF00000851859 cram 396.3 MB
EGAF00000851860 cram 507.8 MB
EGAF00000851861 cram 461.8 MB
EGAF00000851862 cram 535.3 MB
EGAF00000851863 cram 565.7 MB
EGAF00000851864 cram 450.6 MB
EGAF00000851865 cram 445.9 MB
EGAF00000851866 cram 485.4 MB
EGAF00000851867 cram 539.3 MB
EGAF00000851868 cram 440.0 MB
EGAF00000851869 cram 438.1 MB
EGAF00000859641 cram 527.8 MB
EGAF00000859642 cram 619.2 MB
EGAF00000859643 cram 611.9 MB
EGAF00000859644 cram 613.2 MB
EGAF00000859645 cram 608.2 MB
EGAF00000859646 cram 618.2 MB
EGAF00000859647 cram 699.4 MB
EGAF00000859648 cram 554.8 MB
EGAF00000859649 cram 494.2 MB
EGAF00000859650 cram 431.4 MB
EGAF00000859651 cram 466.3 MB
EGAF00000859652 cram 487.8 MB
EGAF00000859653 cram 535.3 MB
EGAF00000859654 cram 512.7 MB
EGAF00000859655 cram 488.9 MB
EGAF00000859656 cram 496.5 MB
EGAF00000859657 cram 508.9 MB
EGAF00000859658 cram 530.1 MB
EGAF00000859659 cram 622.0 MB
EGAF00000859660 cram 613.4 MB
EGAF00000859661 cram 616.1 MB
EGAF00000859662 cram 610.7 MB
EGAF00000859663 cram 620.7 MB
EGAF00000859664 cram 703.3 MB
EGAF00000859665 cram 558.2 MB
EGAF00000859666 cram 463.8 MB
EGAF00000859667 cram 538.1 MB
EGAF00000859668 cram 569.3 MB
EGAF00000859669 cram 452.4 MB
EGAF00000859670 cram 448.0 MB
EGAF00000859671 cram 487.9 MB
EGAF00000859672 cram 541.5 MB
EGAF00000859673 cram 441.1 MB
EGAF00000859674 cram 439.5 MB
EGAF00000859675 cram 496.5 MB
EGAF00000859676 cram 433.4 MB
EGAF00000859677 cram 468.3 MB
EGAF00000859678 cram 490.0 MB
EGAF00000859679 cram 537.5 MB
EGAF00000859680 cram 515.2 MB
EGAF00000859681 cram 491.3 MB
EGAF00000859682 cram 498.5 MB
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