Complete DNA/RNA sequencing dataset for Australian ICGC ovarian cancer sequencing project 2014-07-07

Complete WGS and RNA-Seq dataset for Australian ICGC ovarian cancer sequencing project 2014-07-07, representing 93 donors. Sequencing was performed on Illumina HiSeq. Alignment of the lane-level fastq data was performed with bwa (WGS data) and RSEM (transcriptome data). For this dataset lane-level .bam files have been merged and de-duplicated to create a single bam file for each sample type (tumour/normal) for each donor. This dataset supersedes all previous datasets for this study. 2016-08-08 updated with 14 outstanding RNA-seq samples & corresponding RSEM bams 2016-12-07 updated with 7 outstanding RNA-seq controls and corresponding RSEM bams

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Studies are experimental investigations of a particular phenomenon. e.g. case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients. Click on one of the Study IDs below to find out more.

Study ID Study Title Study Type
EGAS00001000397 Other
ID File Type Size Located in Quality Control
EGAF00000583116 bam 25.6 GB
EGAF00000583117 bam 20.7 GB
EGAF00000583118 bam 106.5 GB
EGAF00000583119 bam 129.5 GB
EGAF00000583120 bam 29.1 GB
EGAF00000583121 bam 86.7 GB
EGAF00000583122 bam 152.7 GB
EGAF00000583123 bam 28.7 GB
EGAF00000583124 bam 106.8 GB
EGAF00000583125 bam 143.8 GB
EGAF00000583126 bam 119.9 GB
EGAF00000583127 bam 147.9 GB
EGAF00000583128 bam 133.1 GB
EGAF00000583129 bam 121.0 GB
EGAF00000583130 bam 22.2 GB
EGAF00000583131 bam 94.9 GB
EGAF00000583132 bam 115.7 GB
EGAF00000583133 bam 161.0 GB
EGAF00000583134 bam 113.8 GB
EGAF00000583135 bam 28.1 GB
EGAF00000583136 bam 30.8 GB
EGAF00000583137 bam 109.1 GB
EGAF00000583138 bam 139.7 GB
EGAF00000583139 bam 169.1 GB
EGAF00000583140 bam 26.3 GB
EGAF00000583141 bam 129.9 GB
EGAF00000583142 bam 110.5 GB
EGAF00000583143 bam 130.0 GB
EGAF00000583144 bam 166.8 GB
EGAF00000583145 bam 120.1 GB
EGAF00000583146 bam 23.0 GB
EGAF00000583147 bam 94.9 GB
EGAF00000583148 bam 51.2 GB
EGAF00000583149 bam 34.3 GB
EGAF00000583150 bam 24.5 GB
EGAF00000583151 bam 137.0 GB
EGAF00000583152 bam 141.6 GB
EGAF00000583153 bam 150.3 GB
EGAF00000583154 bam 158.2 GB
EGAF00000583155 bam 25.9 GB
EGAF00000583156 bam 23.5 GB
EGAF00000583157 bam 27.0 GB
EGAF00000583158 bam 143.0 GB
EGAF00000583159 bam 135.6 GB
EGAF00000583160 bam 153.1 GB
EGAF00000583161 bam 129.1 GB
EGAF00000583162 bam 27.2 GB
EGAF00000583163 bam 106.3 GB
EGAF00000583164 bam 110.1 GB
EGAF00000583165 bam 155.5 GB
EGAF00000583166 bam 31.5 GB
EGAF00000583167 bam 124.2 GB
EGAF00000583168 bam 22.5 GB
EGAF00000583169 bam 24.8 GB
EGAF00000583170 bam 29.3 GB
EGAF00000583171 bam 27.8 GB
EGAF00000583172 bam 121.2 GB
EGAF00000583173 bam 148.3 GB
EGAF00000583174 bam 142.2 GB
EGAF00000583175 bam 118.9 GB
EGAF00000583176 bam 20.2 GB
EGAF00000583177 bam 29.5 GB
EGAF00000583178 bam 162.6 GB
EGAF00000583179 bam 21.0 GB
EGAF00000583180 bam 141.6 GB
EGAF00000583181 bam 127.3 GB
EGAF00000583182 bam 143.8 GB
EGAF00000583183 bam 152.7 GB
EGAF00000583184 bam 140.6 GB
EGAF00000583185 bam 148.4 GB
EGAF00000583186 bam 149.3 GB
EGAF00000583187 bam 91.3 GB
EGAF00000583188 bam 114.7 GB
EGAF00000583189 bam 86.3 GB
EGAF00000583190 bam 22.2 GB
EGAF00000583191 bam 25.7 GB
EGAF00000583192 bam 99.6 GB
EGAF00000583193 bam 99.6 GB
EGAF00000583194 bam 156.9 GB
EGAF00000583195 bam 132.3 GB
EGAF00000583196 bam 26.0 GB
EGAF00000583197 bam 123.0 GB
EGAF00000583198 bam 105.3 GB
EGAF00000583199 bam 21.3 GB
EGAF00000583200 bam 109.4 GB
EGAF00000583201 bam 121.9 GB
EGAF00000583202 bam 31.6 GB
EGAF00000583203 bam 33.8 GB
EGAF00000583204 bam 21.0 GB
EGAF00000583205 bam 111.0 GB
EGAF00000583206 bam 123.1 GB
EGAF00000583207 bam 113.0 GB
EGAF00000583208 bam 143.3 GB
EGAF00000583209 bam 19.2 GB
EGAF00000583210 bam 24.2 GB
EGAF00000583211 bam 27.8 GB
EGAF00000583212 bam 116.8 GB
EGAF00000583213 bam 128.8 GB
EGAF00000583214 bam 145.8 GB
EGAF00000583215 bam 135.6 GB
EGAF00000583216 bam 28.9 GB
EGAF00000583217 bam 27.9 GB
EGAF00000583218 bam 18.9 GB
EGAF00000583219 bam 98.1 GB
EGAF00000583220 bam 112.1 GB
EGAF00000583221 bam 129.1 GB
EGAF00000583222 bam 102.0 GB
EGAF00000583223 bam 22.9 GB
EGAF00000583224 bam 128.5 GB
EGAF00000583225 bam 118.4 GB
EGAF00000583226 bam 21.1 GB
EGAF00000583227 bam 122.8 GB
EGAF00000583228 bam 119.7 GB
EGAF00000583229 bam 139.2 GB
EGAF00000583230 bam 106.2 GB
EGAF00000583231 bam 99.7 GB
EGAF00000583232 bam 28.8 GB
EGAF00000583233 bam 32.2 GB
EGAF00000583234 bam 111.4 GB
EGAF00000583235 bam 25.3 GB
EGAF00000583236 bam 118.5 GB
EGAF00000583237 bam 111.3 GB
EGAF00000583238 bam 118.9 GB
EGAF00000583239 bam 22.9 GB
EGAF00000583240 bam 123.9 GB
EGAF00000583241 bam 18.8 GB
EGAF00000583242 bam 111.0 GB
EGAF00000583243 bam 125.1 GB
EGAF00000583244 bam 136.6 GB
EGAF00000583245 bam 25.4 GB
EGAF00000583246 bam 31.3 GB
EGAF00000583247 bam 211.8 GB
EGAF00000583248 bam 114.1 GB
EGAF00000583249 bam 112.0 GB
EGAF00000583250 bam 26.7 GB
EGAF00000583251 bam 23.6 GB
EGAF00000583252 bam 105.2 GB
EGAF00000583253 bam 121.6 GB
EGAF00000583254 bam 17.8 GB
EGAF00000583255 bam 150.3 GB
EGAF00000583256 bam 117.2 GB
EGAF00000583257 bam 71.5 GB
EGAF00000583258 bam 114.7 GB
EGAF00000583259 bam 24.6 GB
EGAF00000583260 bam 185.2 GB
EGAF00000583261 bam 99.8 GB
EGAF00000583262 bam 157.6 GB
EGAF00000583263 bam 124.6 GB
EGAF00000583264 bam 27.1 GB
EGAF00000583265 bam 157.9 GB
EGAF00000583266 bam 27.6 GB
EGAF00000583267 bam 25.1 GB
EGAF00000583268 bam 117.6 GB
EGAF00000583269 bam 93.4 GB
EGAF00000583270 bam 25.5 GB
EGAF00000583271 bam 28.2 GB
EGAF00000583272 bam 20.8 GB
EGAF00000583273 bam 109.7 GB
EGAF00000583274 bam 119.0 GB
EGAF00000583275 bam 319.3 GB
EGAF00000583276 bam 147.8 GB
EGAF00000583277 bam 24.8 GB
EGAF00000583278 bam 26.2 GB
EGAF00000583279 bam 29.6 GB
EGAF00000583280 bam 149.5 GB
EGAF00000583281 bam 140.5 GB
EGAF00000583282 bam 148.0 GB
EGAF00000583283 bam 128.1 GB
EGAF00000583284 bam 131.7 GB
EGAF00000583285 bam 99.9 GB
EGAF00000583286 bam 117.3 GB
EGAF00000583287 bam 24.6 GB
EGAF00000583288 bam 148.2 GB
EGAF00000583289 bam 117.2 GB
EGAF00000583290 bam 140.8 GB
EGAF00000583291 bam 21.4 GB
EGAF00000583292 bam 34.0 GB
EGAF00000583293 bam 28.6 GB
EGAF00000583294 bam 178.2 GB
EGAF00000583295 bam 146.4 GB
EGAF00000583296 bam 27.2 GB
EGAF00000583297 bam 116.4 GB
EGAF00000583298 bam 183.5 GB
EGAF00000583299 bam 21.0 GB
EGAF00000583300 bam 24.3 GB
EGAF00000583301 bam 20.5 GB
EGAF00000583302 bam 143.4 GB
EGAF00000583303 bam 140.2 GB
EGAF00000583304 bam 146.7 GB
EGAF00000583305 bam 116.3 GB
EGAF00000583306 bam 26.6 GB
EGAF00000583307 bam 182.9 GB
EGAF00000583308 bam 106.1 GB
EGAF00000583309 bam 157.2 GB
EGAF00000583310 bam 102.8 GB
EGAF00000583311 bam 32.7 GB
EGAF00000583312 bam 144.4 GB
EGAF00000583313 bam 110.1 GB
EGAF00000583314 bam 156.4 GB
EGAF00000583315 bam 114.0 GB
EGAF00000583316 bam 135.6 GB
EGAF00000583317 bam 115.3 GB
EGAF00000583318 bam 118.3 GB
EGAF00000583319 bam 26.1 GB
EGAF00000583320 bam 52.1 GB
EGAF00000583321 bam 30.1 GB
EGAF00000583322 bam 146.0 GB
EGAF00000583323 bam 133.9 GB
EGAF00000583324 bam 103.1 GB
EGAF00000583325 bam 97.5 GB
EGAF00000583326 bam 28.8 GB
EGAF00000583327 bam 25.8 GB
EGAF00000583328 bam 28.5 GB
EGAF00000583329 bam 124.5 GB
EGAF00000583330 bam 31.1 GB
EGAF00000583331 bam 25.9 GB
EGAF00000583332 bam 31.6 GB
EGAF00000583333 bam 125.0 GB
EGAF00000583334 bam 114.1 GB
EGAF00000583335 bam 144.2 GB
EGAF00000583336 bam 139.6 GB
EGAF00000583337 bam 24.4 GB
EGAF00000583338 bam 152.8 GB
EGAF00000583339 bam 29.2 GB
EGAF00000583340 bam 104.0 GB
EGAF00000583341 bam 28.6 GB
EGAF00000583342 bam 122.3 GB
EGAF00000583343 bam 128.5 GB
EGAF00000583344 bam 25.5 GB
EGAF00000583345 bam 26.6 GB
EGAF00000583346 bam 99.3 GB
EGAF00000583347 bam 25.3 GB
EGAF00000583348 bam 142.8 GB
EGAF00000583349 bam 28.5 GB
EGAF00000583350 bam 132.7 GB
EGAF00000583351 bam 154.2 GB
EGAF00000583352 bam 20.8 GB
EGAF00000583353 bam 144.9 GB
EGAF00000583354 bam 121.9 GB
EGAF00000583355 bam 103.3 GB
EGAF00000583356 bam 103.0 GB
EGAF00000583357 bam 149.4 GB
EGAF00000583358 bam 135.8 GB
EGAF00000583359 bam 133.9 GB
EGAF00000583360 bam 136.7 GB
EGAF00000583361 bam 141.9 GB
EGAF00000583362 bam 114.7 GB
EGAF00000583363 bam 99.0 GB
EGAF00000583364 bam 114.9 GB
EGAF00000583365 bam 139.2 GB
EGAF00000583366 bam 140.8 GB
EGAF00000583367 bam 19.8 GB
EGAF00000583368 bam 25.6 GB
EGAF00000583369 bam 121.1 GB
EGAF00000583370 bam 148.1 GB
EGAF00000583371 bam 126.0 GB
EGAF00000583372 bam 33.5 GB
EGAF00000583373 bam 120.5 GB
EGAF00000583374 bam 96.8 GB
EGAF00000583375 bam 109.5 GB
EGAF00000583376 bam 145.2 GB
EGAF00000583377 bam 114.7 GB
EGAF00000583378 bam 36.4 GB
EGAF00000583379 bam 96.1 GB
EGAF00000583380 bam 185.2 GB
EGAF00000583381 bam 93.8 GB
EGAF00000583382 bam 97.7 GB
EGAF00000583383 bam 107.8 GB
EGAF00000583384 bam 25.9 GB
EGAF00000583385 bam 137.7 GB
EGAF00000583386 bam 124.5 GB
EGAF00000583387 bam 125.3 GB
EGAF00000583388 bam 109.4 GB
EGAF00000583389 bam 60.7 GB
EGAF00000583390 bam 130.4 GB
EGAF00000583391 bam 69.0 GB
EGAF00000583392 bam 122.0 GB
EGAF00000583393 bam 100.2 GB
EGAF00000583394 bam 29.4 GB
EGAF00000583395 bam 30.9 GB
EGAF00000583396 bam 29.0 GB
EGAF00000583397 bam 102.4 GB
EGAF00000583398 bam 137.2 GB
EGAF00000583399 bam 133.2 GB
EGAF00000583400 bam 114.6 GB
EGAF00000583401 bam 102.0 GB
EGAF00000583402 bam 144.1 GB
EGAF00000583403 bam 107.2 GB
EGAF00000583404 bam 114.0 GB
EGAF00000583405 bam 23.6 GB
EGAF00000583406 bam 126.2 GB
EGAF00000583407 bam 127.4 GB
EGAF00000583408 bam 99.3 GB
EGAF00000583409 bam 162.8 GB
EGAF00000583410 bam 111.5 GB
EGAF00000583411 bam 154.4 GB
EGAF00000583412 bam 26.7 GB
EGAF00000583413 bam 126.0 GB
EGAF00000583414 bam 25.8 GB
EGAF00000583415 bam 34.0 GB
EGAF00000583416 bam 125.9 GB
EGAF00000583417 bam 133.8 GB
EGAF00000583418 bam 148.3 GB
EGAF00000583419 bam 24.4 GB
EGAF00000583420 bam 32.7 GB
EGAF00000583421 bam 53.2 GB
EGAF00000583422 bam 98.1 GB
EGAF00000583423 bam 117.9 GB
EGAF00000583424 bam 268.9 GB
EGAF00000583425 bam 106.1 GB
EGAF00001236211 bam 34.3 GB
EGAF00001236212 bam 34.4 GB
EGAF00001236213 bam 30.6 GB
EGAF00001236214 bam 37.0 GB
EGAF00001236215 bam 35.6 GB
EGAF00001236216 bam 25.0 GB
EGAF00001236217 bam 28.7 GB
EGAF00001236218 bam 36.7 GB
EGAF00001236219 bam 27.4 GB
EGAF00001236220 bam 31.4 GB
EGAF00001236221 bam 29.4 GB
EGAF00001236222 bam 29.2 GB
EGAF00001236223 bam 25.1 GB
EGAF00001236224 bam 25.1 GB
EGAF00001420130 bam 20.0 GB
EGAF00001420131 bam 20.5 GB
EGAF00001420132 bam 25.5 GB
EGAF00001420133 bam 24.2 GB
EGAF00001420134 bam 21.6 GB
EGAF00001420135 bam 25.2 GB
EGAF00001420136 bam 26.0 GB
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