About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Genentech gastric cell line sequencing

RNAseq and exome sequencing data of gastric cancer cell lines.

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GENENTECH DATA ACCESS COMMITTEEDATA ACCESS AGREEMENT

GENENTECH DATA ACCESS COMMITTEEDATA ACCESS AGREEMENT WITH COMMERCIAL ORGANIZATIONThis Data Access Agreement (“Agreement”) between Genentech, Inc. (“Genentech”) and User and User Organization (as defined below) governs the terms on which access will be granted to the genotype data obtained from Genentech.In signing this Agreement, User and User Organization agree to be bound by the terms and conditions of access set out in this Agreement.For the sake of clarity, the terms of access set out in this Agreement apply both to the User and the User Organization (as defined below). User Organization and User are referred to within the Agreement as “You” and “Your” shall be construed accordingly.Definitions: gRED means Genentech Research and Early Development.Data means all and any human genetic data obtained from Genentech and generated by gRED. Data Subject means a person, who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto.User means a researcher whose User Organization has previously completed this Data Access Agreement and has received acknowledgement of its acceptance.Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research.User Organization means the commercial organization at which the User is employed or affiliated.Genentech Data Access Committee means members of the gRED organization that is responsible for making the data access decisions for the genotype data generated by gRED.Terms and Conditions: In signing this Agreement:1.You agree to use the Data only for the advancement of medical research.2.You agree to preserve, at all times, the confidentiality of Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy.3.You agree not to attempt to link the Data provided under this Agreement to other information or archive data available for the data sets provided, even if access to that data has been formally granted to you, or it is freely available without restriction, without specific permission being sought from the relevant access committees.4.You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or program management. Should You wish to share the Data with a collaborator outside the same Organization, the third party must make a separate application for access to the Data.5.You agree to use the Data for the approved purpose and project described in your application; use of the Data for a new purpose or project will require a new application and approval.6.You shall be free to publish the results of the research using the Data for the approved purpose. You agree to acknowledge in any such publication that the research makes use of Data generated by Genentech/gRED.7.You accept that Genentech:a.bears no legal responsibility for the accuracy or comprehensiveness of the Data; and b.accepts no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason.8.You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted.9.You recognize that nothing in this Agreement shall operate to transfer to the User Organization any intellectual property rights relating to the Data. The User Organization has the right to develop intellectual property based on the comparisons with their own data. Any invention or discovery made by User and/or User Organization arising out of the use of the Data (each a “Data Invention”) shall be promptly disclosed to Genentech in writing. User Organization hereby grants to Genentech a royalty-free, fully-paid, non-exclusive license (i) to make, use and import such Data Invention for internal research purposes; and (ii) to make, use, offer to sell, sell and import such Data Invention to the extent necessary to commercialize Genentech product(s), which license shall be sublicensable to Genentech’s affiliates and development and commercialization collaborators on such product(s). 10.You agree that you will submit a report to the Genentech Data Access Committee, if requested, on completion of the agreed purpose. The Genentech Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Organization.11.(a) You agree to use the Data in accordance with all applicable laws, including but not limited to applicable data privacy laws.(b) The Genentech Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures. 12.This Agreement shall be effective as of the date of the last party to sign below (“Effective Date”) and shall terminate three (3) years after the Effective Date, unless terminated sooner pursuant to Section 13 below.13.You accept that this Agreement will terminate immediately upon any breach of this Agreement by You and You will be required to destroy any Data held. Either Party may terminate this Agreement upon thirty (30) days written notice for any reason. The following Sections of this Agreement shall survive its expiration or termination: Sections 1 – 10, 11(a), and 13. For and on behalf of User/Applicant:___________________________Signature of User/Applicant___________________________Print Name of User/Applicant___________________________Title___________________________DateFor and on behalf of User Organization:___________________________Signature of Organizational or Administrative Authority___________________________Print Name___________________________Title___________________________Name of User Organization___________________________DateFor Genentech, Inc.:___________________________Signature___________________________Print Name___________________________Title___________________________Date

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000610 Other
EGAS00001000736 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00000481160 fastq.gz 2.6 GB Report
EGAF00000481161 fastq.gz 2.6 GB Report
EGAF00000481202 fastq.gz 2.5 GB Report
EGAF00000481203 fastq.gz 2.5 GB Report
EGAF00000492383 fastq.gz 8.4 GB Report
EGAF00000492384 fastq.gz 8.4 GB Report
EGAF00000492435 fastq.gz 2.9 GB Report
EGAF00000492436 fastq.gz 2.9 GB Report
EGAF00000492561 fastq.gz 4.4 GB Report
EGAF00000492562 fastq.gz 4.4 GB Report
EGAF00000492597 fastq.gz 2.2 GB Report
EGAF00000492598 fastq.gz 2.2 GB Report
EGAF00000492637 fastq.gz 3.6 GB Report
EGAF00000492638 fastq.gz 3.7 GB Report
EGAF00000492639 fastq.gz 4.5 GB Report
EGAF00000492640 fastq.gz 4.6 GB Report
EGAF00000492679 fastq.gz 4.9 GB Report
EGAF00000492680 fastq.gz 5.0 GB Report
EGAF00000492837 fastq.gz 3.0 GB Report
EGAF00000492838 fastq.gz 2.9 GB Report
EGAF00000492839 fastq.gz 1.5 GB Report
EGAF00000492840 fastq.gz 1.5 GB Report
EGAF00000492841 fastq.gz 5.6 GB Report
EGAF00000492842 fastq.gz 5.6 GB Report
EGAF00000492843 fastq.gz 3.4 GB Report
EGAF00000492844 fastq.gz 3.4 GB Report
EGAF00000493047 fastq.gz 2.3 GB Report
EGAF00000493048 fastq.gz 2.2 GB Report
EGAF00000493055 fastq.gz 3.2 GB Report
EGAF00000493056 fastq.gz 3.2 GB Report
EGAF00000493057 fastq.gz 4.2 GB Report
EGAF00000493058 fastq.gz 4.2 GB Report
EGAF00000493059 fastq.gz 4.9 GB Report
EGAF00000493060 fastq.gz 5.0 GB Report
EGAF00000493083 fastq.gz 2.3 GB Report
EGAF00000493084 fastq.gz 2.3 GB Report
EGAF00000493085 fastq.gz 1.5 GB Report
EGAF00000493086 fastq.gz 1.5 GB Report
EGAF00000493177 fastq.gz 4.0 GB Report
EGAF00000493178 fastq.gz 3.9 GB Report
EGAF00000493273 fastq.gz 3.0 GB Report
EGAF00000493274 fastq.gz 3.0 GB Report
EGAF00000493275 fastq.gz 3.0 GB Report
EGAF00000493276 fastq.gz 3.0 GB Report
EGAF00000493279 fastq.gz 5.1 GB Report
EGAF00000493280 fastq.gz 5.2 GB Report
EGAF00000493291 fastq.gz 6.7 GB Report
EGAF00000493292 fastq.gz 6.7 GB Report
EGAF00000493293 fastq.gz 2.0 GB Report
EGAF00000493294 fastq.gz 2.0 GB Report
EGAF00000493295 fastq.gz 1.8 GB Report
EGAF00000493296 fastq.gz 1.8 GB Report
EGAF00000493297 fastq.gz 5.1 GB Report
EGAF00000493298 fastq.gz 5.1 GB Report
EGAF00000493299 fastq.gz 7.2 GB Report
EGAF00000493300 fastq.gz 7.2 GB Report
EGAF00000493301 fastq.gz 3.6 GB
EGAF00000493301 fastq.gz 3.6 GB Report
EGAF00000493302 fastq.gz 3.6 GB Report
EGAF00000493303 fastq.gz 5.5 GB Report
EGAF00000493304 fastq.gz 5.6 GB Report
EGAF00000604914 fastq.gz 6.6 GB Report
EGAF00000604915 fastq.gz 6.7 GB Report
EGAF00000604916 fastq.gz 6.1 GB Report
EGAF00000604917 fastq.gz 6.2 GB Report
EGAF00000604918 fastq.gz 5.2 GB Report
EGAF00000604919 fastq.gz 5.2 GB Report
EGAF00000604920 fastq.gz 7.3 GB Report
EGAF00000604921 fastq.gz 7.3 GB Report
EGAF00000604922 fastq.gz 8.2 GB Report
EGAF00000604923 fastq.gz 8.1 GB Report
EGAF00000604924 fastq.gz 11.5 GB Report
EGAF00000604925 fastq.gz 11.8 GB Report
EGAF00000604926 fastq.gz 4.3 GB Report
EGAF00000604927 fastq.gz 4.4 GB Report
EGAF00000604928 fastq.gz 6.6 GB Report
EGAF00000604929 fastq.gz 6.6 GB Report
EGAF00000604930 fastq.gz 6.5 GB Report
EGAF00000604931 fastq.gz 6.6 GB Report
EGAF00000604932 fastq.gz 9.0 GB Report
EGAF00000604933 fastq.gz 9.1 GB Report
EGAF00000604934 fastq.gz 7.1 GB Report
EGAF00000604935 fastq.gz 7.1 GB Report
EGAF00000604936 fastq.gz 6.1 GB Report
EGAF00000604937 fastq.gz 6.1 GB Report
EGAF00000604938 fastq.gz 5.1 GB Report
EGAF00000604939 fastq.gz 5.2 GB Report
EGAF00000604940 fastq.gz 4.9 GB Report
EGAF00000604941 fastq.gz 5.0 GB Report
EGAF00000604942 fastq.gz 10.1 GB Report
EGAF00000604943 fastq.gz 10.1 GB Report
EGAF00000604944 fastq.gz 5.3 GB Report
EGAF00000604945 fastq.gz 5.3 GB Report
EGAF00000604946 fastq.gz 5.9 GB Report
EGAF00000604947 fastq.gz 6.0 GB Report
EGAF00000604948 fastq.gz 4.6 GB Report
EGAF00000604949 fastq.gz 4.6 GB Report
EGAF00000614769 fastq.gz 7.2 GB Report
EGAF00000614770 fastq.gz 7.3 GB Report
EGAF00000614771 fastq.gz 6.2 GB Report
EGAF00000614772 fastq.gz 6.3 GB Report
EGAF00000614773 fastq.gz 5.2 GB Report
EGAF00000614774 fastq.gz 5.3 GB Report
103 Files (512.9 GB)