About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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ICR Exome Optimization series

Exome sequencing of 142 samples with corresponding Sanger sequencing results for 416 variants and 288 negative sites. DNA library preps prepared with Illumina TruSeq sample preparation kit. The captured DNA libraries were PCR amplified using the supplied paired-end PCR primers. Sequencing was performed with an Illumina HiSeq2000 (SBS Kit v3, one pool per lane) generating 2x101-bp reads.

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Accessing ICR-GSR data archived in EGA

ICR - Genetic Susceptibility Research (ICR-GSR)Data Access CommitteeAccession number: EGAC00001000235Details of the ICR-GSR Data Access Committee are available for each of the datasets accessible via www.icr.ac.uk/genetic-resourcesAlternatively, please email rahmanlab@icr.ac.uk, giving the above Accession number in the subject line, to request an Application Form for access. This should be completed and and returned to rahmanlab@icr.ac.uk. Applications will only be accepted electronically. Any queries regarding access procedures or completion of the forms should be sent to this email address. Once access has been approved, an agreement will need to be completed. A signed hard copy of the agreement should e-mailed, faxed or posted to: Professor Nazneen Rahman The Institute of Cancer Research, London Division of Genetics & Epidemiology 15 Cotswold Road Sutton SM2 5NG UNITED KINGDOMEmail: rahmanlab@icr.ac.uk Fax: =44(0)20 8722 4359

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001001332 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00000862472 fastq.gz 3.4 GB Report
EGAF00000862473 fastq.gz 3.5 GB Report
EGAF00000862474 fastq.gz 3.8 GB Report
EGAF00000862475 fastq.gz 3.9 GB Report
EGAF00000862476 fastq.gz 905.5 MB Report
EGAF00000862477 fastq.gz 904.1 MB Report
EGAF00000862478 fastq.gz 3.9 GB Report
EGAF00000862479 fastq.gz 3.9 GB Report
EGAF00000862480 fastq.gz 3.5 GB Report
EGAF00000862481 fastq.gz 3.5 GB Report
EGAF00000862482 fastq.gz 4.2 GB Report
EGAF00000862483 fastq.gz 4.2 GB Report
EGAF00000862484 fastq.gz 3.8 GB Report
EGAF00000862485 fastq.gz 3.8 GB Report
EGAF00000862486 fastq.gz 3.4 GB Report
EGAF00000862487 fastq.gz 3.4 GB Report
EGAF00000862488 fastq.gz 3.3 GB Report
EGAF00000862489 fastq.gz 3.3 GB Report
EGAF00000862490 fastq.gz 3.4 GB Report
EGAF00000862491 fastq.gz 3.5 GB Report
EGAF00000862492 fastq.gz 3.9 GB Report
EGAF00000862493 fastq.gz 3.9 GB Report
EGAF00000862494 fastq.gz 3.7 GB Report
EGAF00000862495 fastq.gz 3.7 GB Report
EGAF00000862496 fastq.gz 5.0 GB Report
EGAF00000862497 fastq.gz 5.1 GB Report
EGAF00000862498 fastq.gz 3.4 GB Report
EGAF00000862499 fastq.gz 3.4 GB Report
EGAF00000862500 fastq.gz 3.2 GB Report
EGAF00000862501 fastq.gz 3.3 GB Report
EGAF00000862502 fastq.gz 3.7 GB Report
EGAF00000862503 fastq.gz 3.6 GB Report
EGAF00000862504 fastq.gz 3.3 GB Report
EGAF00000862505 fastq.gz 3.4 GB Report
EGAF00000862506 fastq.gz 3.2 GB Report
EGAF00000862507 fastq.gz 3.2 GB Report
EGAF00000862508 fastq.gz 4.0 GB Report
EGAF00000862509 fastq.gz 4.0 GB Report
EGAF00000862510 fastq.gz 3.5 GB Report
EGAF00000862511 fastq.gz 3.5 GB Report
EGAF00000862512 fastq.gz 2.3 GB Report
EGAF00000862513 fastq.gz 2.3 GB Report
EGAF00000862514 fastq.gz 3.5 GB Report
EGAF00000862515 fastq.gz 3.5 GB Report
EGAF00000862516 fastq.gz 3.2 GB Report
EGAF00000862517 fastq.gz 3.1 GB Report
EGAF00000862518 fastq.gz 2.4 GB Report
EGAF00000862519 fastq.gz 2.4 GB Report
EGAF00000862520 fastq.gz 1.6 GB Report
EGAF00000862521 fastq.gz 1.6 GB Report
EGAF00000862522 fastq.gz 3.9 GB Report
EGAF00000862523 fastq.gz 3.9 GB Report
EGAF00000862524 fastq.gz 3.0 GB Report
EGAF00000862525 fastq.gz 3.0 GB Report
EGAF00000862526 fastq.gz 3.8 GB Report
EGAF00000862527 fastq.gz 3.8 GB Report
EGAF00000862528 fastq.gz 2.9 GB Report
EGAF00000862529 fastq.gz 3.0 GB Report
EGAF00000862530 fastq.gz 1.7 GB Report
EGAF00000862531 fastq.gz 1.7 GB Report
EGAF00000862532 fastq.gz 4.7 GB Report
EGAF00000862533 fastq.gz 4.7 GB Report
EGAF00000862534 fastq.gz 3.7 GB Report
EGAF00000862535 fastq.gz 3.7 GB Report
EGAF00000862536 fastq.gz 3.9 GB Report
EGAF00000862537 fastq.gz 4.0 GB Report
EGAF00000862538 fastq.gz 4.3 GB Report
EGAF00000862539 fastq.gz 4.3 GB Report
EGAF00000862540 fastq.gz 1.6 GB Report
EGAF00000862541 fastq.gz 1.6 GB Report
EGAF00000862542 fastq.gz 3.9 GB Report
EGAF00000862543 fastq.gz 4.0 GB Report
EGAF00000862544 fastq.gz 3.9 GB Report
EGAF00000862545 fastq.gz 4.0 GB Report
EGAF00000862546 fastq.gz 3.6 GB Report
EGAF00000862547 fastq.gz 3.7 GB Report
EGAF00000862548 fastq.gz 2.4 GB Report
EGAF00000862549 fastq.gz 2.4 GB Report
EGAF00000862550 fastq.gz 6.0 GB Report
EGAF00000862551 fastq.gz 5.9 GB Report
EGAF00000862552 fastq.gz 3.9 GB Report
EGAF00000862553 fastq.gz 3.9 GB Report
EGAF00000862554 fastq.gz 4.3 GB Report
EGAF00000862555 fastq.gz 4.4 GB Report
EGAF00000862556 fastq.gz 4.7 GB Report
EGAF00000862557 fastq.gz 4.8 GB Report
EGAF00000862558 fastq.gz 3.7 GB Report
EGAF00000862559 fastq.gz 3.8 GB Report
EGAF00000862560 fastq.gz 3.5 GB Report
EGAF00000862561 fastq.gz 3.6 GB Report
EGAF00000862562 fastq.gz 3.7 GB Report
EGAF00000862563 fastq.gz 3.8 GB Report
EGAF00000862564 fastq.gz 3.6 GB Report
EGAF00000862565 fastq.gz 3.6 GB Report
EGAF00000862566 fastq.gz 3.5 GB Report
EGAF00000862567 fastq.gz 3.5 GB Report
EGAF00000862568 fastq.gz 3.4 GB Report
EGAF00000862569 fastq.gz 3.4 GB Report
EGAF00000862570 fastq.gz 4.4 GB Report
EGAF00000862571 fastq.gz 4.5 GB Report
EGAF00000862572 fastq.gz 3.4 GB Report
EGAF00000862573 fastq.gz 3.4 GB Report
EGAF00000862574 fastq.gz 3.6 GB Report
EGAF00000862575 fastq.gz 3.6 GB Report
EGAF00000862576 fastq.gz 3.9 GB Report
EGAF00000862577 fastq.gz 3.9 GB Report
EGAF00000862578 fastq.gz 3.6 GB Report
EGAF00000862579 fastq.gz 3.6 GB Report
EGAF00000862580 fastq.gz 4.1 GB Report
EGAF00000862581 fastq.gz 4.2 GB Report
EGAF00000862582 fastq.gz 3.5 GB Report
EGAF00000862583 fastq.gz 3.5 GB Report
EGAF00000862584 fastq.gz 4.5 GB Report
EGAF00000862585 fastq.gz 4.6 GB Report
EGAF00000862586 fastq.gz 3.7 GB Report
EGAF00000862587 fastq.gz 3.7 GB Report
EGAF00000862588 fastq.gz 3.7 GB Report
EGAF00000862589 fastq.gz 3.8 GB Report
EGAF00000862590 fastq.gz 3.7 GB Report
EGAF00000862591 fastq.gz 3.8 GB Report
EGAF00000862592 fastq.gz 3.1 GB Report
EGAF00000862593 fastq.gz 3.2 GB Report
EGAF00000862594 fastq.gz 3.8 GB Report
EGAF00000862595 fastq.gz 3.8 GB Report
EGAF00000862596 fastq.gz 4.2 GB Report
EGAF00000862597 fastq.gz 4.2 GB Report
EGAF00000862598 fastq.gz 3.4 GB Report
EGAF00000862599 fastq.gz 3.4 GB Report
EGAF00000862600 fastq.gz 4.2 GB Report
EGAF00000862601 fastq.gz 4.2 GB Report
EGAF00000862602 fastq.gz 4.7 GB Report
EGAF00000862603 fastq.gz 4.7 GB Report
EGAF00000862604 fastq.gz 3.4 GB Report
EGAF00000862605 fastq.gz 3.5 GB Report
EGAF00000862606 fastq.gz 3.8 GB Report
EGAF00000862607 fastq.gz 3.8 GB Report
EGAF00000862608 fastq.gz 2.4 GB Report
EGAF00000862609 fastq.gz 2.4 GB Report
EGAF00000862610 fastq.gz 2.4 GB Report
EGAF00000862611 fastq.gz 2.5 GB Report
EGAF00000862612 fastq.gz 2.1 GB Report
EGAF00000862613 fastq.gz 2.1 GB Report
EGAF00000862614 fastq.gz 4.4 GB Report
EGAF00000862615 fastq.gz 4.6 GB Report
EGAF00000862616 fastq.gz 3.7 GB Report
EGAF00000862617 fastq.gz 3.7 GB Report
EGAF00000862618 fastq.gz 3.3 GB Report
EGAF00000862619 fastq.gz 3.3 GB Report
EGAF00000862620 fastq.gz 5.5 GB Report
EGAF00000862621 fastq.gz 5.5 GB Report
EGAF00000862622 fastq.gz 2.5 GB Report
EGAF00000862623 fastq.gz 2.5 GB Report
EGAF00000862624 fastq.gz 3.3 GB Report
EGAF00000862625 fastq.gz 3.4 GB Report
EGAF00000862626 fastq.gz 2.5 GB Report
EGAF00000862627 fastq.gz 2.5 GB Report
EGAF00000862628 fastq.gz 1.6 GB Report
EGAF00000862629 fastq.gz 1.6 GB Report
EGAF00000862630 fastq.gz 2.1 GB Report
EGAF00000862631 fastq.gz 2.1 GB Report
EGAF00000862632 fastq.gz 2.7 GB Report
EGAF00000862633 fastq.gz 2.7 GB Report
EGAF00000862634 fastq.gz 1.5 GB Report
EGAF00000862635 fastq.gz 1.5 GB Report
EGAF00000862636 fastq.gz 4.8 GB Report
EGAF00000862637 fastq.gz 4.9 GB Report
EGAF00000862638 fastq.gz 1.7 GB Report
EGAF00000862639 fastq.gz 1.7 GB Report
EGAF00000862640 fastq.gz 2.5 GB Report
EGAF00000862641 fastq.gz 2.6 GB Report
EGAF00000862642 fastq.gz 4.0 GB Report
EGAF00000862643 fastq.gz 4.1 GB Report
EGAF00000862644 fastq.gz 3.6 GB Report
EGAF00000862645 fastq.gz 3.7 GB Report
EGAF00000862646 fastq.gz 3.0 GB Report
EGAF00000862647 fastq.gz 3.1 GB Report
EGAF00000862648 fastq.gz 2.5 GB Report
EGAF00000862649 fastq.gz 2.5 GB Report
EGAF00000862650 fastq.gz 2.8 GB Report
EGAF00000862651 fastq.gz 2.8 GB Report
EGAF00000862652 fastq.gz 3.8 GB Report
EGAF00000862653 fastq.gz 3.9 GB Report
EGAF00000862654 fastq.gz 3.4 GB Report
EGAF00000862655 fastq.gz 3.4 GB Report
EGAF00000862656 fastq.gz 1.6 GB Report
EGAF00000862657 fastq.gz 1.7 GB Report
EGAF00000862658 fastq.gz 1.4 GB Report
EGAF00000862659 fastq.gz 1.5 GB Report
EGAF00000862660 fastq.gz 3.8 GB Report
EGAF00000862661 fastq.gz 3.8 GB Report
EGAF00000862662 fastq.gz 2.8 GB Report
EGAF00000862663 fastq.gz 2.8 GB Report
EGAF00000862664 fastq.gz 4.0 GB Report
EGAF00000862665 fastq.gz 3.9 GB Report
EGAF00000862666 fastq.gz 4.3 GB Report
EGAF00000862667 fastq.gz 4.3 GB Report
EGAF00000862668 fastq.gz 2.1 GB Report
EGAF00000862669 fastq.gz 2.0 GB Report
EGAF00000862670 fastq.gz 4.0 GB Report
EGAF00000862671 fastq.gz 4.0 GB Report
EGAF00000862672 fastq.gz 3.9 GB Report
EGAF00000862673 fastq.gz 4.0 GB Report
EGAF00000862674 fastq.gz 1.9 GB Report
EGAF00000862675 fastq.gz 1.8 GB Report
EGAF00000862676 fastq.gz 3.8 GB Report
EGAF00000862677 fastq.gz 3.8 GB Report
EGAF00000862678 fastq.gz 5.2 GB Report
EGAF00000862679 fastq.gz 5.1 GB Report
EGAF00000862680 fastq.gz 4.0 GB Report
EGAF00000862681 fastq.gz 4.0 GB Report
EGAF00000862682 fastq.gz 4.6 GB Report
EGAF00000862683 fastq.gz 4.6 GB Report
EGAF00000862684 fastq.gz 4.2 GB Report
EGAF00000862685 fastq.gz 4.2 GB Report
EGAF00000862686 fastq.gz 3.9 GB Report
EGAF00000862687 fastq.gz 3.9 GB Report
EGAF00000862688 fastq.gz 4.7 GB Report
EGAF00000862689 fastq.gz 4.7 GB Report
EGAF00000862690 fastq.gz 1.8 GB Report
EGAF00000862691 fastq.gz 1.8 GB Report
EGAF00000862692 fastq.gz 4.7 GB Report
EGAF00000862693 fastq.gz 4.7 GB Report
EGAF00000862694 fastq.gz 3.8 GB Report
EGAF00000862695 fastq.gz 3.8 GB Report
EGAF00000862696 fastq.gz 2.5 GB Report
EGAF00000862697 fastq.gz 2.6 GB Report
EGAF00000862698 fastq.gz 4.3 GB Report
EGAF00000862699 fastq.gz 4.3 GB Report
EGAF00000862700 fastq.gz 1.8 GB Report
EGAF00000862701 fastq.gz 1.9 GB Report
EGAF00000862702 fastq.gz 3.5 GB Report
EGAF00000862703 fastq.gz 3.6 GB Report
EGAF00000862704 fastq.gz 4.0 GB Report
EGAF00000862705 fastq.gz 4.0 GB Report
EGAF00000862706 fastq.gz 4.4 GB Report
EGAF00000862707 fastq.gz 4.5 GB Report
EGAF00000862708 fastq.gz 3.2 GB Report
EGAF00000862709 fastq.gz 3.2 GB Report
EGAF00000862710 fastq.gz 1.6 GB Report
EGAF00000862711 fastq.gz 1.6 GB Report
EGAF00000862712 fastq.gz 1.5 GB Report
EGAF00000862713 fastq.gz 1.5 GB Report
EGAF00000862714 fastq.gz 4.0 GB Report
EGAF00000862715 fastq.gz 4.0 GB Report
EGAF00000862716 fastq.gz 4.4 GB Report
EGAF00000862717 fastq.gz 4.3 GB Report
EGAF00000862718 fastq.gz 5.1 GB Report
EGAF00000862719 fastq.gz 5.1 GB Report
EGAF00000862720 fastq.gz 1.6 GB Report
EGAF00000862721 fastq.gz 1.6 GB Report
EGAF00000862722 fastq.gz 3.8 GB Report
EGAF00000862723 fastq.gz 3.8 GB Report
EGAF00000862724 fastq.gz 4.3 GB Report
EGAF00000862725 fastq.gz 4.2 GB Report
EGAF00000862726 fastq.gz 4.0 GB Report
EGAF00000862727 fastq.gz 3.9 GB Report
EGAF00000862728 fastq.gz 4.4 GB Report
EGAF00000862729 fastq.gz 4.4 GB Report
EGAF00000862730 fastq.gz 3.3 GB Report
EGAF00000862731 fastq.gz 3.3 GB Report
EGAF00000862732 fastq.gz 2.2 GB Report
EGAF00000862733 fastq.gz 2.3 GB Report
EGAF00000862734 fastq.gz 5.1 GB Report
EGAF00000862735 fastq.gz 5.1 GB Report
EGAF00000862736 fastq.gz 4.6 GB Report
EGAF00000862737 fastq.gz 4.6 GB Report
EGAF00000862738 fastq.gz 4.1 GB Report
EGAF00000862739 fastq.gz 4.2 GB Report
EGAF00000862740 fastq.gz 4.3 GB Report
EGAF00000862741 fastq.gz 4.3 GB Report
EGAF00000862742 fastq.gz 3.5 GB Report
EGAF00000862743 fastq.gz 3.5 GB Report
EGAF00000862744 fastq.gz 4.3 GB Report
EGAF00000862745 fastq.gz 4.3 GB Report
EGAF00000862746 fastq.gz 3.6 GB Report
EGAF00000862747 fastq.gz 3.7 GB Report
EGAF00000862748 fastq.gz 3.4 GB Report
EGAF00000862749 fastq.gz 3.4 GB Report
EGAF00000862750 fastq.gz 2.3 GB Report
EGAF00000862751 fastq.gz 2.3 GB Report
EGAF00000862752 fastq.gz 5.0 GB Report
EGAF00000862753 fastq.gz 5.0 GB Report
EGAF00000862754 fastq.gz 2.2 GB Report
EGAF00000862755 fastq.gz 2.2 GB Report
284 Files (988.1 GB)