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ICR Exome Optimization series

Exome sequencing of 142 samples with corresponding Sanger sequencing results for 416 variants and 288 negative sites. DNA library preps prepared with Illumina TruSeq sample preparation kit. The captured DNA libraries were PCR amplified using the supplied paired-end PCR primers. Sequencing was performed with an Illumina HiSeq2000 (SBS Kit v3, one pool per lane) generating 2x101-bp reads.

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Accessing ICR-GSR data archived in EGA

ICR - Genetic Susceptibility Research (ICR-GSR)Data Access CommitteeAccession number: EGAC00001000235Details of the ICR-GSR Data Access Committee are available for each of the datasets accessible via www.icr.ac.uk/genetic-resourcesAlternatively, please email rahmanlab@icr.ac.uk, giving the above Accession number in the subject line, to request an Application Form for access. This should be completed and and returned to rahmanlab@icr.ac.uk. Applications will only be accepted electronically. Any queries regarding access procedures or completion of the forms should be sent to this email address. Once access has been approved, an agreement will need to be completed. A signed hard copy of the agreement should e-mailed, faxed or posted to: Professor Nazneen Rahman The Institute of Cancer Research, London Division of Genetics & Epidemiology 15 Cotswold Road Sutton SM2 5NG UNITED KINGDOMEmail: rahmanlab@icr.ac.uk Fax: =44(0)20 8722 4359

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001001332 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00000862472 fastq.gz 3.4 GB
EGAF00000862473 fastq.gz 3.5 GB
EGAF00000862474 fastq.gz 3.8 GB
EGAF00000862475 fastq.gz 3.9 GB
EGAF00000862476 fastq.gz 905.5 MB
EGAF00000862477 fastq.gz 904.1 MB
EGAF00000862478 fastq.gz 3.9 GB
EGAF00000862479 fastq.gz 3.9 GB
EGAF00000862480 fastq.gz 3.5 GB
EGAF00000862481 fastq.gz 3.5 GB
EGAF00000862482 fastq.gz 4.2 GB
EGAF00000862483 fastq.gz 4.2 GB
EGAF00000862484 fastq.gz 3.8 GB
EGAF00000862485 fastq.gz 3.8 GB
EGAF00000862486 fastq.gz 3.4 GB
EGAF00000862487 fastq.gz 3.4 GB
EGAF00000862488 fastq.gz 3.3 GB
EGAF00000862489 fastq.gz 3.3 GB
EGAF00000862490 fastq.gz 3.4 GB
EGAF00000862491 fastq.gz 3.5 GB
EGAF00000862492 fastq.gz 3.9 GB
EGAF00000862493 fastq.gz 3.9 GB
EGAF00000862494 fastq.gz 3.7 GB
EGAF00000862495 fastq.gz 3.7 GB
EGAF00000862496 fastq.gz 5.0 GB
EGAF00000862497 fastq.gz 5.1 GB
EGAF00000862498 fastq.gz 3.4 GB
EGAF00000862499 fastq.gz 3.4 GB
EGAF00000862500 fastq.gz 3.2 GB
EGAF00000862501 fastq.gz 3.3 GB
EGAF00000862502 fastq.gz 3.7 GB
EGAF00000862503 fastq.gz 3.6 GB
EGAF00000862504 fastq.gz 3.3 GB
EGAF00000862505 fastq.gz 3.4 GB
EGAF00000862506 fastq.gz 3.2 GB
EGAF00000862507 fastq.gz 3.2 GB
EGAF00000862508 fastq.gz 4.0 GB
EGAF00000862509 fastq.gz 4.0 GB
EGAF00000862510 fastq.gz 3.5 GB
EGAF00000862511 fastq.gz 3.5 GB
EGAF00000862512 fastq.gz 2.3 GB
EGAF00000862513 fastq.gz 2.3 GB
EGAF00000862514 fastq.gz 3.5 GB
EGAF00000862515 fastq.gz 3.5 GB
EGAF00000862516 fastq.gz 3.2 GB
EGAF00000862517 fastq.gz 3.1 GB
EGAF00000862518 fastq.gz 2.4 GB
EGAF00000862519 fastq.gz 2.4 GB
EGAF00000862520 fastq.gz 1.6 GB
EGAF00000862521 fastq.gz 1.6 GB
EGAF00000862522 fastq.gz 3.9 GB
EGAF00000862523 fastq.gz 3.9 GB
EGAF00000862524 fastq.gz 3.0 GB
EGAF00000862525 fastq.gz 3.0 GB
EGAF00000862526 fastq.gz 3.8 GB
EGAF00000862527 fastq.gz 3.8 GB
EGAF00000862528 fastq.gz 2.9 GB
EGAF00000862529 fastq.gz 3.0 GB
EGAF00000862530 fastq.gz 1.7 GB
EGAF00000862531 fastq.gz 1.7 GB
EGAF00000862532 fastq.gz 4.7 GB
EGAF00000862533 fastq.gz 4.7 GB
EGAF00000862534 fastq.gz 3.7 GB
EGAF00000862535 fastq.gz 3.7 GB
EGAF00000862536 fastq.gz 3.9 GB
EGAF00000862537 fastq.gz 4.0 GB
EGAF00000862538 fastq.gz 4.3 GB
EGAF00000862539 fastq.gz 4.3 GB
EGAF00000862540 fastq.gz 1.6 GB
EGAF00000862541 fastq.gz 1.6 GB
EGAF00000862542 fastq.gz 3.9 GB
EGAF00000862543 fastq.gz 4.0 GB
EGAF00000862544 fastq.gz 3.9 GB
EGAF00000862545 fastq.gz 4.0 GB
EGAF00000862546 fastq.gz 3.6 GB
EGAF00000862547 fastq.gz 3.7 GB
EGAF00000862548 fastq.gz 2.4 GB
EGAF00000862549 fastq.gz 2.4 GB
EGAF00000862550 fastq.gz 6.0 GB
EGAF00000862551 fastq.gz 5.9 GB
EGAF00000862552 fastq.gz 3.9 GB
EGAF00000862553 fastq.gz 3.9 GB
EGAF00000862554 fastq.gz 4.3 GB
EGAF00000862555 fastq.gz 4.4 GB
EGAF00000862556 fastq.gz 4.7 GB
EGAF00000862557 fastq.gz 4.8 GB
EGAF00000862558 fastq.gz 3.7 GB
EGAF00000862559 fastq.gz 3.8 GB
EGAF00000862560 fastq.gz 3.5 GB
EGAF00000862561 fastq.gz 3.6 GB
EGAF00000862562 fastq.gz 3.7 GB
EGAF00000862563 fastq.gz 3.8 GB
EGAF00000862564 fastq.gz 3.6 GB
EGAF00000862565 fastq.gz 3.6 GB
EGAF00000862566 fastq.gz 3.5 GB
EGAF00000862567 fastq.gz 3.5 GB
EGAF00000862568 fastq.gz 3.4 GB
EGAF00000862569 fastq.gz 3.4 GB
EGAF00000862570 fastq.gz 4.4 GB
EGAF00000862571 fastq.gz 4.5 GB
EGAF00000862572 fastq.gz 3.4 GB
EGAF00000862573 fastq.gz 3.4 GB
EGAF00000862574 fastq.gz 3.6 GB
EGAF00000862575 fastq.gz 3.6 GB
EGAF00000862576 fastq.gz 3.9 GB
EGAF00000862577 fastq.gz 3.9 GB
EGAF00000862578 fastq.gz 3.6 GB
EGAF00000862579 fastq.gz 3.6 GB
EGAF00000862580 fastq.gz 4.1 GB
EGAF00000862581 fastq.gz 4.2 GB
EGAF00000862582 fastq.gz 3.5 GB
EGAF00000862583 fastq.gz 3.5 GB
EGAF00000862584 fastq.gz 4.5 GB
EGAF00000862585 fastq.gz 4.6 GB
EGAF00000862586 fastq.gz 3.7 GB
EGAF00000862587 fastq.gz 3.7 GB
EGAF00000862588 fastq.gz 3.7 GB
EGAF00000862589 fastq.gz 3.8 GB
EGAF00000862590 fastq.gz 3.7 GB
EGAF00000862591 fastq.gz 3.8 GB
EGAF00000862592 fastq.gz 3.1 GB
EGAF00000862593 fastq.gz 3.2 GB
EGAF00000862594 fastq.gz 3.8 GB
EGAF00000862595 fastq.gz 3.8 GB
EGAF00000862596 fastq.gz 4.2 GB
EGAF00000862597 fastq.gz 4.2 GB
EGAF00000862598 fastq.gz 3.4 GB
EGAF00000862599 fastq.gz 3.4 GB
EGAF00000862600 fastq.gz 4.2 GB
EGAF00000862601 fastq.gz 4.2 GB
EGAF00000862602 fastq.gz 4.7 GB
EGAF00000862603 fastq.gz 4.7 GB
EGAF00000862604 fastq.gz 3.4 GB
EGAF00000862605 fastq.gz 3.5 GB
EGAF00000862606 fastq.gz 3.8 GB
EGAF00000862607 fastq.gz 3.8 GB
EGAF00000862608 fastq.gz 2.4 GB
EGAF00000862609 fastq.gz 2.4 GB
EGAF00000862610 fastq.gz 2.4 GB
EGAF00000862611 fastq.gz 2.5 GB
EGAF00000862612 fastq.gz 2.1 GB
EGAF00000862613 fastq.gz 2.1 GB
EGAF00000862614 fastq.gz 4.4 GB
EGAF00000862615 fastq.gz 4.6 GB
EGAF00000862616 fastq.gz 3.7 GB
EGAF00000862617 fastq.gz 3.7 GB
EGAF00000862618 fastq.gz 3.3 GB
EGAF00000862619 fastq.gz 3.3 GB
EGAF00000862620 fastq.gz 5.5 GB
EGAF00000862621 fastq.gz 5.5 GB
EGAF00000862622 fastq.gz 2.5 GB
EGAF00000862623 fastq.gz 2.5 GB
EGAF00000862624 fastq.gz 3.3 GB
EGAF00000862625 fastq.gz 3.4 GB
EGAF00000862626 fastq.gz 2.5 GB
EGAF00000862627 fastq.gz 2.5 GB
EGAF00000862628 fastq.gz 1.6 GB
EGAF00000862629 fastq.gz 1.6 GB
EGAF00000862630 fastq.gz 2.1 GB
EGAF00000862631 fastq.gz 2.1 GB
EGAF00000862632 fastq.gz 2.7 GB
EGAF00000862633 fastq.gz 2.7 GB
EGAF00000862634 fastq.gz 1.5 GB
EGAF00000862635 fastq.gz 1.5 GB
EGAF00000862636 fastq.gz 4.8 GB
EGAF00000862637 fastq.gz 4.9 GB
EGAF00000862638 fastq.gz 1.7 GB
EGAF00000862639 fastq.gz 1.7 GB
EGAF00000862640 fastq.gz 2.5 GB
EGAF00000862641 fastq.gz 2.6 GB
EGAF00000862642 fastq.gz 4.0 GB
EGAF00000862643 fastq.gz 4.1 GB
EGAF00000862644 fastq.gz 3.6 GB
EGAF00000862645 fastq.gz 3.7 GB
EGAF00000862646 fastq.gz 3.0 GB
EGAF00000862647 fastq.gz 3.1 GB
EGAF00000862648 fastq.gz 2.5 GB
EGAF00000862649 fastq.gz 2.5 GB
EGAF00000862650 fastq.gz 2.8 GB
EGAF00000862651 fastq.gz 2.8 GB
EGAF00000862652 fastq.gz 3.8 GB
EGAF00000862653 fastq.gz 3.9 GB
EGAF00000862654 fastq.gz 3.4 GB
EGAF00000862655 fastq.gz 3.4 GB
EGAF00000862656 fastq.gz 1.6 GB
EGAF00000862657 fastq.gz 1.7 GB
EGAF00000862658 fastq.gz 1.4 GB
EGAF00000862659 fastq.gz 1.5 GB
EGAF00000862660 fastq.gz 3.8 GB
EGAF00000862661 fastq.gz 3.8 GB
EGAF00000862662 fastq.gz 2.8 GB
EGAF00000862663 fastq.gz 2.8 GB
EGAF00000862664 fastq.gz 4.0 GB
EGAF00000862665 fastq.gz 3.9 GB
EGAF00000862666 fastq.gz 4.3 GB
EGAF00000862667 fastq.gz 4.3 GB
EGAF00000862668 fastq.gz 2.1 GB
EGAF00000862669 fastq.gz 2.0 GB
EGAF00000862670 fastq.gz 4.0 GB
EGAF00000862671 fastq.gz 4.0 GB
EGAF00000862672 fastq.gz 3.9 GB
EGAF00000862673 fastq.gz 4.0 GB
EGAF00000862674 fastq.gz 1.9 GB
EGAF00000862675 fastq.gz 1.8 GB
EGAF00000862676 fastq.gz 3.8 GB
EGAF00000862677 fastq.gz 3.8 GB
EGAF00000862678 fastq.gz 5.2 GB
EGAF00000862679 fastq.gz 5.1 GB
EGAF00000862680 fastq.gz 4.0 GB
EGAF00000862681 fastq.gz 4.0 GB
EGAF00000862682 fastq.gz 4.6 GB
EGAF00000862683 fastq.gz 4.6 GB
EGAF00000862684 fastq.gz 4.2 GB
EGAF00000862685 fastq.gz 4.2 GB
EGAF00000862686 fastq.gz 3.9 GB
EGAF00000862687 fastq.gz 3.9 GB
EGAF00000862688 fastq.gz 4.7 GB
EGAF00000862689 fastq.gz 4.7 GB
EGAF00000862690 fastq.gz 1.8 GB
EGAF00000862691 fastq.gz 1.8 GB
EGAF00000862692 fastq.gz 4.7 GB
EGAF00000862693 fastq.gz 4.7 GB
EGAF00000862694 fastq.gz 3.8 GB
EGAF00000862695 fastq.gz 3.8 GB
EGAF00000862696 fastq.gz 2.5 GB
EGAF00000862697 fastq.gz 2.6 GB
EGAF00000862698 fastq.gz 4.3 GB
EGAF00000862699 fastq.gz 4.3 GB
EGAF00000862700 fastq.gz 1.8 GB
EGAF00000862701 fastq.gz 1.9 GB
EGAF00000862702 fastq.gz 3.5 GB
EGAF00000862703 fastq.gz 3.6 GB
EGAF00000862704 fastq.gz 4.0 GB
EGAF00000862705 fastq.gz 4.0 GB
EGAF00000862706 fastq.gz 4.4 GB
EGAF00000862707 fastq.gz 4.5 GB
EGAF00000862708 fastq.gz 3.2 GB
EGAF00000862709 fastq.gz 3.2 GB
EGAF00000862710 fastq.gz 1.6 GB
EGAF00000862711 fastq.gz 1.6 GB
EGAF00000862712 fastq.gz 1.5 GB
EGAF00000862713 fastq.gz 1.5 GB
EGAF00000862714 fastq.gz 4.0 GB
EGAF00000862715 fastq.gz 4.0 GB
EGAF00000862716 fastq.gz 4.4 GB
EGAF00000862717 fastq.gz 4.3 GB
EGAF00000862718 fastq.gz 5.1 GB
EGAF00000862719 fastq.gz 5.1 GB
EGAF00000862720 fastq.gz 1.6 GB
EGAF00000862721 fastq.gz 1.6 GB
EGAF00000862722 fastq.gz 3.8 GB
EGAF00000862723 fastq.gz 3.8 GB
EGAF00000862724 fastq.gz 4.3 GB
EGAF00000862725 fastq.gz 4.2 GB
EGAF00000862726 fastq.gz 4.0 GB
EGAF00000862727 fastq.gz 3.9 GB
EGAF00000862728 fastq.gz 4.4 GB
EGAF00000862729 fastq.gz 4.4 GB
EGAF00000862730 fastq.gz 3.3 GB
EGAF00000862731 fastq.gz 3.3 GB
EGAF00000862732 fastq.gz 2.2 GB
EGAF00000862733 fastq.gz 2.3 GB
EGAF00000862734 fastq.gz 5.1 GB
EGAF00000862735 fastq.gz 5.1 GB
EGAF00000862736 fastq.gz 4.6 GB
EGAF00000862737 fastq.gz 4.6 GB
EGAF00000862738 fastq.gz 4.1 GB
EGAF00000862739 fastq.gz 4.2 GB
EGAF00000862740 fastq.gz 4.3 GB
EGAF00000862741 fastq.gz 4.3 GB
EGAF00000862742 fastq.gz 3.5 GB
EGAF00000862743 fastq.gz 3.5 GB
EGAF00000862744 fastq.gz 4.3 GB
EGAF00000862745 fastq.gz 4.3 GB
EGAF00000862746 fastq.gz 3.6 GB
EGAF00000862747 fastq.gz 3.7 GB
EGAF00000862748 fastq.gz 3.4 GB
EGAF00000862749 fastq.gz 3.4 GB
EGAF00000862750 fastq.gz 2.3 GB
EGAF00000862751 fastq.gz 2.3 GB
EGAF00000862752 fastq.gz 5.0 GB
EGAF00000862753 fastq.gz 5.0 GB
EGAF00000862754 fastq.gz 2.2 GB
EGAF00000862755 fastq.gz 2.2 GB
284 Files (988.1 GB)