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PRDM9 loss of function follow up from Born-in-Bradford Autozygosity sequencing

In the autozygosity exome sequencing of Born-in-Bradford samples of Pakistani origin there is a mother who is homozygous for an apparent truncating stop codon in PRDM9, the gene responsible for localising recombination during meiosis. We plan to deep sequence mother and child with X10, and physically phase the mother with PacBio sequencing. We will use this data to identify recombination locations, and test whether these are consistent with the known fine scale recombination map. Data Access is controlled by the Wellcome Trust Sanger Institute DAC and the Born In Bradford Executive Group.

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001001301 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00000922324 cram 39.9 GB
EGAF00000922410 cram 41.6 GB
EGAF00000922411 cram 42.2 GB
EGAF00000922412 cram 3.1 GB
EGAF00000922413 cram 3.0 GB
EGAF00000922414 cram 3.1 GB
EGAF00000922415 cram 2.7 GB
EGAF00000922416 cram 2.6 GB
EGAF00000922417 cram 3.2 GB
EGAF00000922418 cram 3.0 GB
EGAF00000922419 cram 3.1 GB
EGAF00000922420 cram 2.9 GB
EGAF00000922421 cram 2.4 GB
EGAF00000922422 cram 3.0 GB
EGAF00000922423 cram 3.1 GB
EGAF00000922424 cram 3.0 GB
EGAF00000922425 cram 2.6 GB
EGAF00000922426 cram 2.5 GB
EGAF00000922427 cram 3.1 GB
EGAF00000922428 cram 3.2 GB
EGAF00000922429 cram 3.3 GB
EGAF00000922430 cram 3.1 GB
EGAF00000922431 cram 2.6 GB
EGAF00000922432 cram 2.5 GB
EGAF00000922433 cram 3.0 GB
EGAF00000922434 cram 2.9 GB
EGAF00000922435 cram 3.1 GB
EGAF00000922436 cram 3.3 GB
EGAF00000922437 cram 3.1 GB
EGAF00000922438 cram 3.0 GB
EGAF00000922439 cram 3.3 GB
EGAF00000922440 cram 3.4 GB
EGAF00000922441 cram 3.2 GB
EGAF00000922442 cram 3.1 GB
EGAF00000922443 cram 2.7 GB
EGAF00000922444 cram 2.6 GB
EGAF00000922445 cram 3.3 GB
EGAF00000922446 cram 3.4 GB
EGAF00000922447 cram 3.2 GB
EGAF00000922448 cram 3.1 GB
EGAF00000922449 cram 3.3 GB
EGAF00000922450 cram 2.6 GB
EGAF00000922451 cram 2.9 GB
EGAF00000922452 cram 3.2 GB
EGAF00000922453 cram 3.3 GB
EGAF00000922454 cram 2.9 GB
EGAF00000922455 cram 3.0 GB
EGAF00000922456 cram 2.6 GB
EGAF00000922457 cram 2.4 GB
EGAF00000922458 cram 3.0 GB
EGAF00000922459 cram 2.9 GB
51 Files (266.6 GB)